Nicotiana sylvestris (wood tobacco): 104237531
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Entry
104237531 CDS
T05026
Name
(RefSeq) pumilio homolog 5
KO
K17943
pumilio RNA-binding family
Organism
nsy
Nicotiana sylvestris (wood tobacco)
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
DUF445
Motif
Other DBs
NCBI-GeneID:
104237531
NCBI-ProteinID:
XP_009789996
UniProt:
A0A1U7XK63
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Position
3:complement(183300767..183310646)
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AA seq
1008 aa
AA seq
DB search
METESPMRILEDSRTEKWVPSKDMVSFVSPGNEVAADELGLLLKGHKIHGHNRNKVPNRS
GSAPPSMEGSFSAFGNLVHDQSSGRKLSLASLDSAMQNWQSEEQMRADPSYSAYYSSNIN
LNPRLPPPIISRENMHLAHHFADLGDSCQLNSSDNSGDASLHVSRSSLSTHDEEPEDENL
PRSALDDLAQSRASGQHMASFAGQHKSLVDLIQEDFPRTPSPVYNQSRPSCHVAVEEPTD
CDIQSIKLDGLSVDISNKPGAGACADVSGDHNIAVPDQSLAISLEKESSVDSLGRSPSPQ
KGEISASDDAPLVNELLVSDGIASGISKNFPAPEISDNKDEQYFHGRNGVGQQQQQQYHS
QRIAAYQVNSPQVQANILGTNALQSSLAKGYGHSWFSSVEVQAVPQGSGLTPPLYATAAA
YMASGNPYYSNLSPPGVYAPHYNVGGYALASPSLPPFVAGYPSHSGLSVHINAGSGRSIS
GQSVTPRENIPQVGDLQHLTKFYGHHGLMVHPSFPDPFHMQYFHHPVDDSNTAPGRYMRF
PSSGLVGLEVDAYASNMEPNLPYIAEQNFNRPPIGSLNLPSPGKMIIPGNSYFGSPSGLG
FAQQFPASPLGSPVLPGSPMGRRSEIKSTPASGRNIGLCSGWPAQRGSGSFNDSKRHSFL
EELKQSNARRIDLPDIAGRVIEFSVDQHGSRFIQQKLENCSIEEKASVFKEILPHASKLM
TDVFGNYVIQKFFEHGSHEQRKMLACQLKGQMLPLSLQMYGCRVIQKALEVIDLDQKIEL
VHELNGHVLRCVRDQNGNHVIQKCIECIPTEKISIIISSFQSQVAILSTHPYGCRVIQRV
LERCSENPQSQCIVHEILDSAYALAQDQYGNYVTQHVLERGKPHERSRIIEKLTGNVVQL
SQHKYASNVVEKCLEYGDSAERELLIEEILADSEANDNLLSMMKDQFANYVVQKILEISN
DKHRDILLSRIRVHLHALKKYTYGKHIVARFEQLSEQLSDEDIGTCEP
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccgagagccctatgagaatactcgaagacagtagaacagaaaagtgggttcct
tccaaggacatggtctcctttgtgtcccctgggaatgaagtggcagctgatgaactggga
ttgcttcttaaaggtcataagattcatgggcataatagaaataaggttccaaatcgtagt
ggtagtgcgcctccaagtatggagggctcattttcagcctttggtaaccttgtccatgat
caaagctctggccggaagttgagtttggcaagcttagacagtgccatgcaaaactggcag
tctgaagagcagatgcgtgctgatccctcctattctgcttactacagctctaatatcaac
ttgaatcctaggcttcctcctcctattatttcaagggagaacatgcacttggcacaccat
tttgcggatctgggtgatagctgccagttaaattcttctgacaatagtggggatgcatcc
ttgcacgtgagtagaagttctctttcaactcatgatgaggagcctgaagatgaaaattta
ccacgaagtgctttagacgatctggcccaaagtcgtgcttcaggacagcacatggcctcc
tttgcaggtcaacataaaagtttagttgacctaatccaggaggacttccctcgcactcca
tcaccagtttacaatcaatctcggccctcatgtcatgttgctgtggaggaaccaactgat
tgtgatattcaatctattaaactggacggtctgtccgttgacatttcaaataaaccaggt
gcaggcgcttgtgcggatgtctcaggtgaccataatatagctgtccccgatcagtctttg
gccatttctcttgaaaaagaatcttctgttgacagtcttgggaggtctccttcccctcag
aagggtgaaatatcagctagtgatgatgcacctctggtgaatgagctcttagtcagcgat
gggatagcatcaggtatttcaaagaactttccagctccagagattagtgacaacaaggat
gaacaatattttcatggtaggaatggagtaggacagcaacagcagcagcagtatcactcc
caacgaatcgcagcttaccaagttaatagcccacaagttcaagcaaatattcttgggact
aatgcactacagagtagcctagcaaaaggttatggtcatagctggttctcctcagttgag
gtacaagcagttcctcaaggttctggcctcacgcctcctctatatgcaacagctgcagcc
tatatggcttccggcaacccatactattctaacttgagtccacctggtgtatatgcccct
cattacaatgtagggggatatgctttggcttcaccttctcttcctccatttgtagctgga
tatccatctcattctggtctatctgtgcatattaatgctggttctggacgaagcatcagt
ggtcaaagtgttacaccaagagaaaacattccacaagttggtgatctgcaacatttaacc
aagttttatgggcatcatgggttaatggtgcatccttctttcccagatcctttccatatg
cagtattttcatcaccctgttgatgattcaaacactgctcctggtcggtatatgcggttt
ccatcatcgggcttggttgggctagaagttgatgcttatgcctcaaatatggagccaaat
ctcccttatattgctgaacagaattttaatcgtccaccaattggaagcctgaacttacca
agtcctggaaaaatgataattcctggtaatagttattttggaagtccatcaggcctggga
ttcgcacaacagtttccagcctcgcctcttggtagtcctgtattgccaggatcccctatg
ggtagaaggagtgaaattaaatctacccctgcttcgggtagaaatattggattgtgttct
ggatggcctgcacaaagaggttctggtagctttaatgattctaaaagacattcatttctc
gaagaactgaaacaaagcaatgctcgaagaattgacctccctgatattgcaggtcgtgta
attgaattcagcgttgatcagcatgggagtcggtttatacagcagaaattggaaaattgt
agtattgaagagaaggcatctgttttcaaagaaattcttccacatgcttcaaaactaatg
acagatgtgtttgggaattatgtcattcaaaagttctttgagcatggaagtcatgagcaa
agaaagatgttggcatgtcaattaaaaggacagatgctgcctttaagtttgcaaatgtat
ggctgtcgtgttattcaaaaggccttagaagttatcgatcttgatcagaaaatagaactt
gtccatgaactcaatgggcatgtactgaggtgtgtgcgagatcaaaatgggaaccatgta
atccaaaaatgcattgagtgcatacctaccgaaaaaattagtattattatctcctcattc
caaagccaagtagctatattgtctactcatccctatggttgccgtgtaatccagagagta
ttggaacgttgttcagaaaaccctcaaagtcagtgtatagtacatgaaatcttggattct
gcttatgctcttgctcaagatcagtatgggaactatgtcacccagcatgttctggagagg
ggaaaaccacatgaaagaagtcgaattattgaaaagttgaccggaaatgttgtacaatta
agtcaacacaaatatgcctcaaatgttgttgaaaaatgtctggaatatggtgattctgct
gagagggagcttttgattgaggagatacttgcagattcagaagcaaatgacaatttgctg
tcgatgatgaaggaccaatttgcgaattatgtggtccagaagattctcgagattagcaac
gataagcaccgcgacattctgctcagtcgaatcagagttcatcttcatgctttgaagaaa
tacacctacggaaaacacatagtggctcgatttgaacagctgtctgaacagctctctgat
gaagatattggaacatgtgaaccctag
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