Nicotiana sylvestris (wood tobacco): 104237606
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Entry
104237606 CDS
T05026
Name
(RefSeq) transcription initiation factor TFIID subunit 15b
KO
K13098
RNA-binding protein FUS
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03015
mRNA surveillance pathway
nsy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104237606
09122 Translation
03015 mRNA surveillance pathway
104237606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nsy03041
]
104237606
Spliceosome [BR:
nsy03041
]
Complex A
Other components
Complex A specific factors
104237606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
RRM_MARF1
Motif
Other DBs
NCBI-GeneID:
104237606
NCBI-ProteinID:
XP_009790083
UniProt:
A0A1U7XGT1
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All DBs
Position
6:193513358..193517235
Genome browser
AA seq
461 aa
AA seq
DB search
MAGTYGYEGGGSAPPSGGGGYGGSGGGGGGGGYGGSGGGGYGSGGGGYGGASGGYGGSGG
SYGGGGGRDGGGGGGRGGGGGYGGSSHSRGGGGGGYQGGGDRGGRGGGGGGGRGGGSGKE
GDWRCPNPSCGNLNFARRVECNKCGAPSPAGSDDRGGRGGSGYNRGGSGGGYGNSRGGRG
DNYDDRNAGGGRTGSYGGSQGRDGGGYAQGPPHAPPSYGAADSNYPPPSNTYGRNPDAVP
PPTSYVGGPASYPPSYGAPGGYGGDKTANARGGGRGGPPGGYDGGYGGGQRNAGGYDSSP
AEAPEKVKQCDENCGDFCDNARIYISNLPPDVTIEELRELFGSIGQVARIKQKRGYKDQW
PWSIKLYTDEQGKNKGDAVLSYEDPSAAHSAGGFFNNHDFRGYKISVAMAEKSAPKPAPA
FGSGRGGRGGYGGGGRRDNYRDSGGSGPDRQSHGGNRSRPY
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcacgtacgggtacgaaggcggcggatctgctccgccgtctggtggcggaggc
tacggaggtagcggcggcggaggaggcggtggtggttacggtggttctggaggcggcggg
tatggatcaggtggtggaggatatggcggtgcaagcggcggttatggaggcagcggaggg
tcatacggcggtggaggtggtagagatggtggtggtggtggtggtagaggaggtggagga
ggatacggtggtagttcacatagtcgaggaggtggcggcggcggataccaaggaggagga
gatcgtggaggtcgcggcggcggcggcggcggcggtcgtggtggaggaagtggtaaggaa
ggtgattggcgttgccctaaccctagctgtggaaatttgaactttgctagaagagttgaa
tgtaacaaatgtggtgcaccttcacctgctggttctgacgatcgtggtggcagaggtggt
agcggttataacagaggtggaagtggtgggggatatggaaatagtcgagggggaagaggc
gacaactatgatgacagaaatgctggaggtggtagaacaggttcttatggtggtagtcag
ggaagagatggtggtggttatgctcaaggtcctccacatgctcctccatcttatggggca
gctgatagcaactatccaccaccatctaatacctatggtcggaaccctgatgccgtcccc
ccgcccacgagttatgttggtggacctgcatcttatcccccttcatatggtgcccctggt
ggctatggtggggataaaacagctaatgcccgtgggggtggaaggggtggcccaccggga
ggatatgatgggggatatggcggtggtcaaaggaatgcaggtggttatgatagttcccca
gctgaggctccggaaaaggtcaagcaatgtgatgagaactgtggagatttctgtgacaac
gcaagaatatatatctcaaatttgcctcctgatgtgaccattgaagaacttagagaactt
tttgggagcattggacaagtggcaagaatcaagcaaaaacgaggctacaaagaccagtgg
ccttggagcataaagttatacactgacgaacagggaaaaaacaaaggagatgctgttttg
tcatatgaagacccttctgcagcgcactctgcgggtggctttttcaataaccatgacttc
agagggtacaaaatcagtgttgcgatggctgaaaagtctgcaccaaagcctgctccagct
tttggttctggacgtggaggtcgaggaggttatggtggcggcggccgcagggataactac
agagacagtggaggttctggcccggatagacagtctcatggtggaaaccgttcacgtcct
tattga
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