Nicotiana sylvestris (wood tobacco): 104237889
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Entry
104237889 CDS
T05026
Name
(RefSeq) cyclin-dependent kinase D-3-like isoform X1
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03022
Basal transcription factors
nsy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104237889
09124 Replication and repair
03420 Nucleotide excision repair
104237889
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
nsy01001
]
104237889
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsy03021
]
104237889
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104237889
03400 DNA repair and recombination proteins [BR:
nsy03400
]
104237889
Enzymes [BR:
nsy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
104237889
2.7.11.23 [RNA-polymerase]-subunit kinase
104237889
Protein kinases [BR:
nsy01001
]
Serine/threonine kinases: CMGC group
CDK family
104237889
Transcription machinery [BR:
nsy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
104237889
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
104237889
DNA repair and recombination proteins [BR:
nsy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
104237889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Haspin_kinase
Seadorna_VP7
Motif
Other DBs
NCBI-GeneID:
104237889
NCBI-ProteinID:
XP_009790422
UniProt:
A0A1U7XED3
LinkDB
All DBs
Position
8:complement(216376250..216382155)
Genome browser
AA seq
412 aa
AA seq
DB search
MAEVDNLLTKKVADRYLKREILGEGTYGVVFKAIDTKSGQTVAIKKIRLGKQKEGVNFTA
LREIKLLKELKDPHVIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKSYIQ
MTLKGLAFCHKKYVLHRDMKPNNLLIGPNGQLKLADFGLARLFGSPDRRFTHQVFARWYR
APELLFGAKQYGPGVDVWAAACIFAELLLRRPFLQGNSDIDQLGKIFAAFGTPKPSQWAD
MVYLPDYVEYQYVPGQPLKTLFPTATEDALDLLSKMFSYDPKARISAQQALEHRYFSSGP
LPTEPALLPRPPPKRESANPRVSEFNPHDGPVVLSPPRKSRRVMPQREGFEANMRPEKMD
DHGNAGERSEQVPMSLDFSVFGMRPPTRPTINSADRSHLKRKLDLEFQPEEE
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagtagacaatttattgacaaaaaaagtagcagatcgttacctaaaacgtgaa
attttaggtgaaggtacttatggtgttgtcttcaaggccattgatactaagagtggccag
actgttgctatcaagaaaattcgtcttgggaaacagaaagaaggggtgaatttcactgcc
cttagggaaataaaattattgaaagagctgaaggatcctcacgttattgaattgattgat
gccttccctcacaaaggaaacttgcatcttgtgtttgagttcatggagacagatcttgag
gctgtgattcgtgataggaatatcttcctctcacctgcggatataaaatcttatatccag
atgacattgaaaggacttgctttttgtcacaagaaatatgtcttgcatagagatatgaaa
ccaaacaatttattgattggacctaatgggcagcttaaacttgctgactttggattagca
cgtctatttggtagccctgatagaagattcactcaccaggtctttgcccggtggtataga
gcaccagagttattgtttggtgcaaagcagtatggacctggagtagatgtttgggccgct
gcatgtatctttgccgagctcctcctgcgtcgaccatttctgcagggaaacagtgatatt
gatcagctgggaaagatttttgcggcttttgggaccccaaagccttcgcagtgggctgat
atggtctacttgcctgattatgtggagtaccaatatgtccctggacagccactgaaaaca
ttgtttccaacggctactgaggatgctttagatcttctgtcaaagatgttctcatacgac
ccaaaagctagaatatcagcacagcaagctttggagcataggtacttctcatcaggacct
ctacctacagaaccagctctgcttccaagacctccccccaagcgggaatccgcaaaccct
agggtttcagagttcaatccacatgatggtcctgtagtattgtctccaccaagaaagtca
aggagagtgatgccacagcgcgaaggatttgaggcaaatatgcgtccagagaagatggat
gaccatggaaatgccggtgagaggagtgaacaggtacccatgtcactggatttctcagtc
tttgggatgagaccacctactagaccgaccattaacagcgctgacagatcacatttaaag
aggaaattagatcttgaattccaacccgaagaggaataa
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