Nicotiana sylvestris (wood tobacco): 104238004
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Entry
104238004 CDS
T05026
Name
(RefSeq) BRCT domain-containing protein At4g02110-like
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104238004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nsy03032
]
104238004
03400 DNA repair and recombination proteins [BR:
nsy03400
]
104238004
DNA replication proteins [BR:
nsy03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
104238004
DNA repair and recombination proteins [BR:
nsy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
104238004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
PHD
Motif
Other DBs
NCBI-GeneID:
104238004
NCBI-ProteinID:
XP_009790562
UniProt:
A0A1U7XES8
LinkDB
All DBs
Position
2:216029683..216040956
Genome browser
AA seq
1410 aa
AA seq
DB search
MTEGNQDMLYEDRSKIFIGVRFVLVGFDPLRKWKIRSKLLEGGAVDVSGYGPDCTHLIVD
SIVYDDPICLAARQDGKIIVTSLWVEQSYDMGMALDHHSIMYRPPRDLNGIPGAKSLVVC
LTGYTGPDRDDIMKMVGLMGANFSKPLVANKVTHLICYKFEGDKYELAKKTKTIKLVNHH
WLEDCLRSWEILPEDDYDKSGYELMMMEAEAKDSEEENEGIAANRHGEKIAIMGPDHSKS
PNQFLVKQEASTNTSDLRTFRGLSGLGNTKELSLSASKQSKSHQVPAFEESPNRDTKMLN
TNLCRTKEELPSSIEQNGSDFVFVSSSARKSPHSCSSREIPRKFNLPMTSEQIKTYAGSP
ATAEAGTEFDFLNLSSERDQEKSELGAKTSKNLSFPGKGQSSRLPEKRPLGISDSSFQSS
RTSNNPESIQDGYLTANRTEQLVHTSKLHSPRKIGCHLSSRNTAPHYDNGVTLHTYHDST
ISNPVTLSTQRGCDEDEPQSGTFRIMESKGNSHGTVDVNGPLDELYDVLSPVTERRDTLK
FNVLAGFDKAGDDSVSGSKPLRKTSLSKKIPTSDVNGPLDELHDVPSPVNERRDTLKSNV
LAEFNKAGDDSMSGSKPMKKRSLSKKTLGSRQSFRRGDDRNQKGSLSINKTALMSDSAAS
SGGGREETEHQNNLNSTNGEALPANNADSSKENERNKFLNSEKETAKTNESINDDTEAPE
DQDDEELNVLKEKSTDTEAQRSRLRSMEKKLNVNKVVNQDDMRDTDVAKSQSTENNKSET
QKILSDKKTKLSESTYVGKASVEKVSSGPNYLMKNSKKTNVATKRALVSTEGVEGKKCRT
DGKKADAKKAKGSPSKKGEVLPADLSKEIERNKILDSEKETAKTTESINDDTEAPEDQED
EELNVLREKSSDTEAQHSRLRSMEKRLNVNNVVNQNDMKDTDVAKTQSIENNTSDTPKTL
SGKKTKLSESTSVEASEEKVSKGPKHLMKNSKKTNLATKRVAVSTEGAERKKCRPDKANA
KKGKGPPSETGKTTVIATEHQSERSMDVEKENIPDVGGQNASHAKHGADRSSPYDKKLRS
VQVTKVQSEPRWFIVSGHRLQRKEFQQVIKRLKGKVCRDSHQWSYQATDFIVPAPLRRTE
KFFAAASSGRWILKTDYLTACVEAGKFLDEEPYEWHKKGLTEDLAINLEAPRKWRLLRER
TGHGALYGMRIIIYGDCIVPPLETLKRAVKAGDGIILATAPPYSRFLESGVDFAIVSEVM
PRCDKWVQEFLRHEIPCVLPDYLVTYVCKPGYPLNNYVQYNTHAWAERALQKHVNRLEEI
VEEMVRSNDDKNDLACQVCGSPDREEVMLICGDESASHGCGIGMHVDCCDPPLECVPEED
WFCPECSKNRSNTSIKRKSKKGTSTSKRKK
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaggcaaccaagatatgttatacgaagaccgctccaaaattttcattggtgtt
cgatttgttcttgtcggattcgatccccttagaaaatggaagattcggtcgaagcttttg
gagggtggtgcagttgatgtaagcggatatggaccagattgcacccatcttattgtcgat
agtattgtctatgatgaccccatatgtttagctgctcgacaggatgggaaaataattgtt
accagcttgtgggttgagcaaagttatgacatgggaatggctttggatcaccattctatc
atgtacagacctccaagggatttgaatggaatcccgggtgctaaatcactggtggtctgc
ttaactggatatacggggccagatcgagatgatattatgaaaatggtgggcctgatgggt
gcaaacttttcaaagccattggtggcaaacaaagtcactcatctcatatgctacaaattt
gagggggataaatatgagcttgccaagaaaacgaagacgataaagcttgttaatcaccac
tggttggaggattgtttaaggtcttgggaaatccttccagaggatgattatgataagagt
gggtatgagttgatgatgatggaagctgaagccaaagattctgaagaagaaaatgagggc
attgctgcaaataggcatggagagaaaatagctatcatgggtcctgatcattcaaaaagt
cctaatcaattccttgtgaagcaggaagcctctacaaacacttcagacttacgcacattt
agaggtttgtcaggtctgggaaacactaaggagctatcgttatctgcttcgaagcagtca
aaatctcatcaggttccagcctttgaagaatctcccaacagggatactaagatgcttaat
accaacttgtgtaggacaaaggaagagctgccatctagcattgaacaaaatggaagtgat
tttgtttttgtttcaagtagtgccaggaaatcccctcattcttgttcgtcccgagaaatc
ccaaggaaattcaaccttcccatgacctcagaacaaattaagacttacgcaggaagtcct
gctactgctgaagcaggtacagaatttgatttccttaacctgtcctcagagagggatcaa
gagaaaagtgagttaggtgcaaaaacttcaaagaacttgtcatttcctgggaagggtcaa
agcagtagactgcccgagaaaaggccgttgggcatttcagatagtagcttccagtcatca
aggactagtaataatccagaaagcatacaagatggttacttgacggcaaatcgtactgag
cagttagtacacacgtcaaagttacatagtccacgcaaaataggctgtcatctatcatct
aggaacactgcccctcactatgacaatggtgtaactcttcatacttatcatgattctacc
atttccaatcctgtgacactaagcactcagcgagggtgtgatgaggatgaacctcaaagt
ggcacttttaggatcatggagtcaaaagggaatagtcatggcactgttgatgttaatggg
ccattggatgaactatatgatgtcctatctcctgttactgaaagaagagataccctgaag
tttaatgtgctggcggggttcgataaagctggagatgattcagtgtcagggtctaagcca
ttgaggaaaacatcgctttccaagaagatacccacctctgatgttaatgggccattagat
gaactgcatgatgtcccttctccagttaatgaaagaagagataccctgaagtctaatgtg
ctggctgagtttaacaaggctggagatgattcgatgtcagggtctaaaccaatgaagaaa
cgatcgctttccaagaagacactgggatctagacaaagtttccgtagaggggatgatagg
aatcagaaagggtctttatccattaacaagactgctctgatgtctgattcagctgcttcc
agtggcggcggaagagaggagacagagcatcaaaataacttaaactctacaaatggtgag
gctctccctgcaaataatgcagattcaagcaaagagaatgagagaaataaatttttgaat
tctgaaaaagaaactgccaaaacaaatgaatccataaatgatgatactgaggctcctgag
gaccaagacgatgaggagttaaacgttttaaaagagaagtctactgatactgaagcgcaa
cgttctaggcttcgatcaatggagaagaaattaaatgtgaacaaggtggtaaatcaggat
gatatgagggatactgatgttgcaaagagccaaagtactgaaaacaacaaatctgaaact
caaaagattctttctgacaagaagaccaagttaagtgaatcaacttatgtggggaaagct
tcagtggagaaagtttccagtggcccaaattatctgatgaagaatagcaagaaaactaat
gttgcaactaaaagagctctggtttctacagaaggagtagaagggaagaagtgcagaact
gatggaaagaaggcagatgcaaaaaaggcaaaagggtctccatctaaaaagggtgaggtt
ctgcctgcagatttgagcaaagagattgagagaaataaaattttggattctgaaaaagaa
actgccaaaactactgaatcgataaatgatgatactgaggctccagaggatcaagaagat
gaggagttaaatgttctaagagagaagtcttctgatactgaagcgcagcattctaggctt
cgatcaatggagaagaggttaaatgtgaataatgttgtaaatcagaatgatatgaaggat
actgatgttgcaaagacacaaagtattgaaaacaacacatctgatactccaaagactctt
tctggcaagaaaaccaagttaagtgaatcaacttctgtggaagcttcagaggagaaagtt
tccaaaggtccaaaacatctgatgaagaatagcaagaaaactaacctagctactaaaaga
gttgcggtttctacagaaggtgcagaaaggaagaagtgcagacctgataaggcaaatgca
aaaaagggaaaagggcctccatctgaaacaggtaaaaccacagtaattgcaacagagcat
caatctgagagatccatggatgtggaaaaggagaatatacctgatgtgggaggccagaac
gcgagtcatgctaaacatggggctgacagaagttctccttacgacaaaaaacttcgctca
gtgcaggttacaaaagtacaaagtgagccaaggtggtttatagttagtgggcatcggcta
caaagaaaggagtttcagcaagttatcaagcgattgaaaggaaaagtgtgcagagattct
caccagtggtcatatcaggcaacagatttcattgtccctgctccattgcgaagaacagag
aagttttttgctgctgcatcctctggaaggtggatcctcaaaacggattatttaactgct
tgtgtcgaggctggaaaattcttagatgaggagccatatgaatggcacaaaaagggattg
actgaagacttagctatcaacttagaggccccaagaaagtggagacttctgagggagagg
actggacatggcgcattatatgggatgaggataatcatatatggagactgcattgtacca
ccattggaaacattgaagcgagcagtcaaggctggagatggcattatattagcaactgct
cctccatacagtcgcttccttgagtcaggtgttgactttgccattgttagtgaggtgatg
ccacgttgtgacaagtgggtgcaagaattcttaaggcatgagataccttgtgtgttgcct
gattacttggtgacttatgtgtgcaaacctggttatcccctcaacaattatgtacaatac
aacactcatgcttgggcagaaagggcgctgcaaaaacatgtcaatcgcttggaagagatt
gttgaggagatggtacggtcgaatgacgataagaatgatttagcatgccaagtatgcggg
tcgcctgacagggaggaagtaatgctgatctgtggtgacgaaagtgcctctcacggatgt
ggcattggcatgcacgtagattgctgtgatcctccccttgaatgtgtaccagaggaagac
tggttttgcccagaatgtagcaagaatagaagcaacacaagcatcaaaaggaagtccaaa
aaggggacctctacttccaagaggaagaagtga
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