Nicotiana sylvestris (wood tobacco): 104238037
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Entry
104238037 CDS
T05026
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104238037
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nsy01009
]
104238037
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104238037
03036 Chromosome and associated proteins [BR:
nsy03036
]
104238037
Protein phosphatases and associated proteins [BR:
nsy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
104238037
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
104238037
Chromosome and associated proteins [BR:
nsy03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
104238037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
104238037
NCBI-ProteinID:
XP_009790604
UniProt:
A0A1U7XUL2
LinkDB
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Position
3:192137514..192146297
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AA seq
518 aa
AA seq
DB search
MNGGDGGDVATAPAGPPPPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKTGDHLATGDR
GGRVVLFERTDTKEHIGSRRELERMDYPVSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKI
NKIRWCQSPNGALFLLSTNDKTIKFWKVQEKKVKKLSDMTIDPPRAVGNGSVASSSVSSS
PKQCLANGSNADRSFNCLSNDLSFPPGGISSLRLPVVVTSNETSLVARCRRVYAHAHDYH
INSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPTNMEDLTEVITSAEFHPTHC
NTLAYSSSKGSIRLIDLRQSALCDSHSKLFEEQEAPGSRSFFTEIIASISDIKFSKDGRY
ILSRDYMTLKLWDINMDSGPVSTFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVAT
GSYSNLFRVFGCAAGTTEATTLEASKNPMRRQVQTPSRPSRSLSSSITRVVRRGSESPGV
DANGNSFDFTTKLLHLAWHPTENSIACAAANSLYMYYA
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtggtgatggtggagatgtcgcgacagctccggcgggtccaccaccgccgctt
gagtggaaattctctcaggtatttggtgagcgtacggccggcgaggaagttcaggaagtt
gatatcatctccgcaattgagttcgataaaactggtgaccatcttgctactggagatcgt
gggggtagggtggtattatttgaaaggactgatacaaaagagcatattggtagtcgaaga
gagctagagagaatggactatcctgtgagtcgccatccagagttccgctacaagacagaa
tttcaaagccatgaacctgagtttgattatctgaagagtttggagattgaggagaaaatc
aacaagatccgttggtgccaatcgcctaatggtgcactctttcttctatctaccaacgac
aaaaccataaagttttggaaggtccaagagaagaaagttaagaagctatccgatatgact
atcgatcctcccagggctgttgggaatggcagtgtggccagttctagtgtttcttccagt
ccaaagcaatgtcttgcaaatgggagcaatgcagatagatctttcaattgcttgagcaat
gatttgtcgtttccacccgggggcatttcctcattgcgtttacctgtggtagttacaagt
aatgagaccagccttgttgcaaggtgcagaagagtgtatgctcatgcacatgactatcat
atcaactctatttcaaataacagtgatggcgaaacatttatatcggctgacgatcttcgt
ataaacctgtggaacttggaaataagcaatcagagtttcaacattgttgatgtcaagccg
acaaatatggaagatctaactgaggtgataacttcagcagaatttcatcctactcactgt
aacactttagcttatagtagttcaaaagggtcaattcgtctcatagatctgcggcagtca
gctttatgcgactcacattctaaattgttcgaggaacaagaagcacctggttcaagatct
tttttcaccgagataattgcttcaatttcagatattaaattttccaaggatggaagatac
atactcagtcgtgactatatgaccctaaagctatgggacataaatatggattctggtcca
gtatcaaccttccaggttcatgaatatttgagaccaaagctatgtgatttatatgagaac
gactccatttttgataagttcgagtgttgccttagtggtgatgggctgcgagtagcaact
ggttcttatagcaatcttttccgtgtttttggttgtgctgcggggactactgaagctact
acactggaagctagcaaaaaccccatgagaagacaagtgcagaccccttcaaggccttcc
aggtccctgagcagtagcataacacgtgtagtcaggagaggatcagagagtccaggggtt
gatgcaaatggaaattcatttgatttcacaacaaagctgctccatctagcatggcatcca
actgaaaattcgattgcctgtgccgctgcaaacagcttgtatatgtactacgcataa
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