Nicotiana sylvestris (wood tobacco): 104238151
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Entry
104238151 CDS
T05026
Name
(RefSeq) E3 ubiquitin-protein ligase PUB24-like
KO
K27970
U-box gene family group I [EC:
2.3.2.27
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nsy04121
]
104238151
Enzymes [BR:
nsy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104238151
Ubiquitin system [BR:
nsy04121
]
Ubiquitin ligases (E3)
U-box type E3
104238151
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
U-box
ARM_ARMC5
zf-Nse
zf-RING_UBOX
zf-NOSIP
ZSWIM4-8_C
Motif
Other DBs
NCBI-GeneID:
104238151
NCBI-ProteinID:
XP_009790743
UniProt:
A0A1U7XIN9
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Position
11:117467422..117468850
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AA seq
419 aa
AA seq
DB search
MEEVEIPQYFLCPISLQIMKDPVTTVTGITYDRESIEMWLLTAEEETETAACPVTKQPLP
KDTELLTPNHMLRRLIQAWCIVNAEKGVDRIPTPKYPMNKSNILRLIRQVNNNDHQLCAE
ALRKMADLVSENEKNRKCMEQVGAIKAMVYFIVKSFKCEKLIPGIEEALRIFQLIWNPIS
ENKQYVKDNHDLVQAILWILKSELKTSHVLIKTHAMMVLKNVTEVSSSNLLSGLDPDFFR
QMANTLRKNGKYYISQQATKAALQVLIDACPWGRNRLKIVESGAIFELIELELSNPEKRV
SELVFCLLANLCVLADGRAELLKHAAGIAVVTKRTLRISSATDDSALQILGLIAKFSATN
EVLLEMLRVGGVSKLCMVIQADCEPHLKKKAREILRAHSHIWSNSPCIQVYLLTRYPGQ
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagtagagataccccaatattttttatgtcctatatcacttcaaataatgaaa
gatccggtgacgacggtgaccggaataacgtacgaccgggaaagcatcgagatgtggttg
ttaacggcggaggaagagacggagacggcagcgtgtccggtaacaaagcaacctttgcca
aaagacaccgagttgttgacaccaaatcatatgctccggcggctaattcaagcttggtgc
atagtcaacgcagagaaaggcgttgaccgaattccaacaccaaagtatcctatgaacaaa
tcgaatattctccgattaattcgacaagttaataataatgatcatcagctttgtgctgaa
gctttgaggaaaatggctgatttggttagtgagaatgagaagaataggaaatgcatggag
caagttggtgcaattaaggctatggtttatttcatagtaaaaagtttcaaatgtgagaaa
ttaattcctggtattgaagaagctttgaggattttccagttaatttggaatccgatatcc
gaaaacaagcagtatgtaaaggataaccatgatttagttcaagctattttatggattttg
aagagcgaattaaaaaccagtcacgtcctaatcaagactcatgcaatgatggtcttgaag
aacgtgacagaagtctcgagttcaaatcttttatcaggattagaccccgattttttccga
caaatggcgaatacattgcgaaaaaatggaaagtactacatctctcaacaagcaacaaaa
gcagctttgcaagtgctaatagatgcatgtccatggggaagaaataggctaaaaatcgtc
gaatcgggagccattttcgagctaattgagctagaattatctaaccctgagaaaagggtt
agtgaattagtattctgtctattggctaatctgtgtgtattagctgatgggagagcagaa
ttgttgaaacatgcagctggaattgcagtggtcacaaaaaggacactaaggatatcttca
gctacagatgatagtgcacttcaaattcttggtttaattgctaagttttctgccacaaac
gaagtgttattggaaatgttaagagtaggaggggtatcaaaactttgcatggtaattcaa
gcagattgcgaacctcatttgaagaagaaagcaagagagatattgagagcacattctcat
atttggagtaattctccttgtatacaagtttatcttttgacaagatatcctgggcaatag
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