Nicotiana sylvestris (wood tobacco): 104238410
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Entry
104238410 CDS
T05026
Name
(RefSeq) transcription initiation factor TFIID subunit 4b-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104238410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsy03021
]
104238410
03036 Chromosome and associated proteins [BR:
nsy03036
]
104238410
Transcription machinery [BR:
nsy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104238410
Coactivators
SAGA/TFTC/STAGA complex
104238410
Chromosome and associated proteins [BR:
nsy03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
104238410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
ParG
Motif
Other DBs
NCBI-GeneID:
104238410
NCBI-ProteinID:
XP_070028399
LinkDB
All DBs
Position
4:153073327..153088005
Genome browser
AA seq
933 aa
AA seq
DB search
MDPSIMKLLEEDEDETMHSGADVEAFTAALNRDIGGADNSQSQPSDSDSVPLSQGSSYTS
NQFASWQTSNHDENGSRHSLQDSEAVQQKDGNISDMQLKGHGTDSQKQQQKNDSSQEIIS
LPLQHISSQDTYQTTEVEQDTLHSSKAVNIQNPEKNTQNPESQHLNLQGAKSQQSMQSLT
TGTSGLPLVAADASNQSESATGSSSQSAINVAKQGKQVPFAMLFPHIQPQLDKDRAMQLQ
TLYVKLKKNEISKEGFVRHMRSIIGDQMLKMAVYKFQSQASRNSPSVPGQFPQSAASQQQ
HSQMPTDDSSNMAIESNAQKLREVENQADLRGAQGNQMPSSSLIAVKQERDHSPFPIQGL
NRQQQQHLHFSQASFPTFPSAGNNYSAYSASNLNSSTTQPLKQQSDDAQMRQFSAQQNRN
ATQLGVPTQAVGMMSAPKFEKQNTFGEAKRLPCGSLNIPTTSRTQQPSVQWQQSANKEQR
SILSSPMTNLKSEPIDHFHDQLQRSQLSPFSSVQVEQGNSTSESSKDESIEQISRIGLST
TSMKPSNLASSSMSSQMDTSTLLSSRTTSVTSLLGPGNSGKTPVKKPSIGQKKPLDTLGS
SPPPSGKKQKVSGAFLDQSIEQLNDVTAVSGVNLREEEEQLFSGPKEDSRVSEASRRVVQ
EEEEKLILQKIPLQKKLTEIMAKCGLKNMSNDVERCLSLCVEERMRGLISSLIRLSKQRV
DIEKSRHRTIVTSDVREEILSINRKAREEWEKKQADVEKLQKANEPEGSNGVDGDKEKDD
GRGKSIKANKEEDDKMRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGGDVASGSQ
PSKDVTRRNLSTPTRTSKDHQEAENRSQSSAKVTPGAVRRAGRNQVITQTRIARSITVKD
VIAVLEREPQMSKSTLIYRLYEKARSNASAESS
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggatccttctatcatgaaactcctcgaagaagacgaggatgaaacaatgcattcgggg
gcggatgtggaggcattcactgctgccctaaatagggatattggaggcgcagataattca
caatctcagccatccgattccgatagcgtacccttatctcaaggaagcagttatacctca
aatcagtttgcatcatggcaaacttctaaccatgacgaaaatggcagtcgtcatagtctt
caagattcagaggccgttcagcaaaaggatggaaatatatctgatatgcagttaaaggga
catggtaccgattctcagaaacagcagcaaaaaaatgattcctcacaggagatcatttcc
cttcctttgcagcatatatcttcccaggatacttatcaaaccacagaggttgaacaggac
acacttcattcttctaaagcagtgaatatacaaaatcctgaaaagaatactcaaaatcca
gaatctcaacatctaaacttacagggagcgaaaagtcagcagtccatgcagtccttgaca
acaggaactagtggtctgccacttgtggcagcagatgcaagtaatcagtcagaatcggcg
accgggtcgagcagccaatcagcaatcaatgtagctaaacagggaaaacaagtgcctttt
gccatgcttttccctcacatacaaccccagcttgataaggacagggcaatgcaactccag
actctttacgttaaactcaaaaaaaatgaaatttctaaggaaggttttgtaagacacatg
agaagtataattggtgaccaaatgctcaaaatggctgtatataaatttcaatctcaggca
tctagaaactcaccgagtgttcccggtcaatttcctcagtctgcggcttctcagcagcaa
cattcgcaaatgccaacagatgattctagtaatatggcaattgagagtaatgctcaaaag
ttgcgcgaggtggaaaatcaggcagatttgcgtggagcccaaggaaaccagatgccttct
tctagtttgattgctgtaaaacaagaaagggatcactcaccattcccaatacagggactt
aataggcaacaacaacagcatttgcacttctcacaggcatcatttcccacatttccaagt
gcagggaacaattatagtgcatattctgcatctaatctcaactcttcaacaacacaaccg
ctaaagcagcaatctgatgatgcacaaatgagacaattttcagctcaacagaacagaaat
gcaactcagttaggagtgccaacgcaggccgtgggaatgatgagcgcccctaagtttgaa
aagcaaaacacttttggcgaagccaaaagattaccttgtgggagtcttaatattccaact
acttcaagaacccagcagccttcagttcaatggcaacagtctgccaataaagagcagaga
agtattctttcatcaccaatgaccaatctaaagtctgaaccaattgatcatttccatgac
cagctacaaagatcccagttgtcgcccttctcctctgttcaagtggagcaaggaaattcc
acttcagaaagttcaaaggatgaatctattgaacagatctccagaattggtttatcaacc
actagcatgaaaccttcaaatttagcctcgtcttccatgtcatctcaaatggatactagc
acattgttgagttctcggactacttctgtgacatctctacttgggccaggaaacagtgga
aagactcctgtgaaaaagccttccattggacagaagaagcccctcgatacgctaggttcc
tcacctccaccttcagggaagaagcaaaaggtttcaggagcttttttagatcagagcatt
gaacaacttaatgatgttactgctgttagtggagttaatctaagggaagaggaagaacaa
ctattttctgggcccaaggaggacagtcgagtttcggaagcatctcgacgagttgtgcaa
gaagaagaggaaaagctgattttgcagaaaattccacttcagaagaaattgacagaaatc
atggcaaaatgtggtttaaagaatatgagcaatgatgtggaacgatgtttgtcattgtgt
gtggaggaaagaatgcgtggacttataagtagtctcatcagactgtcaaaacagagagtt
gacatagagaagtcaagacacagaacaattgtcacttcagatgttcgtgaagaaatcctg
tcaatcaatcgaaaagcccgggaagaatgggaaaagaaacaggctgatgtggaaaaactc
caaaaggcaaatgaacctgaaggtagtaatggagttgacggtgataaggagaaggatgat
ggtcgtgggaaatcaataaaggcaaacaaggaagaagatgataagatgcgaactacagct
gcaaatgttgctgctcgagctgctgttggaggggatgacatgttgtcaaagtggcaattg
atggctgagcaggccaggcaaaagcgtgaagggggaggtgatgtggcttctggttcacag
cctagtaaagatgtgactcggaggaatttatcgactcccacaagaacctcaaaggaccat
caagaagctgagaacaggagtcagtcatctgcaaaagtcacacctggtgctgtgagaaga
gctgggagaaatcaagtgataacccagactaggattgctcgcagtattactgtaaaggat
gtgatcgctgtcctagaaagggaacctcaaatgtctaagtctacattgatataccgcttg
tatgagaaagctcggtccaatgcttcagctgaatcatcgtga
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