KEGG   Nicotiana sylvestris (wood tobacco): 104238709
Entry
104238709         CDS       T05026                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27 homolog
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104238709
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nsy03041]
    104238709
   03400 DNA repair and recombination proteins [BR:nsy03400]
    104238709
Spliceosome [BR:nsy03041]
 Complex B
  Other components
   Prp19 complex
    104238709
 Complex C
   Prp19-CDC5 complex
    104238709
DNA repair and recombination proteins [BR:nsy03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    104238709
SSDB
Motif
Pfam: BCAS2 Spectrin THOC7 bZIP_1 YabA
Other DBs
NCBI-GeneID: 104238709
NCBI-ProteinID: XP_009791461
UniProt: A0A1U7XHD4
LinkDB
Position
3:206566030..206570573
AA seq 250 aa
MATTNGDVLMLEAPPESRPAVCSSAEVIDALPYIDDDYGDPKVKEEVDRLVEEEMRRSSK
KPSDFLKDLPPLPKFNFENHPMLAREYERVRAGKPPVQIDTSRYGLEVPPLNKRNDETAW
KQALQKAQRLLQHQVIRLENLDLMSKHGPDVWKLHNQRLEAFLARMQSQAVELNEMIETV
NRERKYHQQTTAYELSALSMQWKELCLKNMEIQSACGELEDHIEQLKKEAQERDWNLEAN
VENSKMLYAE
NT seq 753 nt   +upstreamnt  +downstreamnt
atggcgacaacgaacggtgacgttttaatgctagaggcaccgccggagtcccggccggcg
gtgtgtagtagtgctgaagtgatcgatgctttgccgtacattgatgacgactacggtgac
cccaaagttaaagaagaggtggaccgtttggtcgaagaggagatgcgccgcagctccaaa
aaaccttccgatttcctcaaggacctccctcctcttcctaaattcaacttcgagaatcac
ccgatgcttgcgagggaatatgagagggtgagagctggaaagccgccggtacagatagat
acttcacgatatggacttgaagtgccgccactgaacaaacgcaatgatgaaactgcatgg
aaacaagcgcttcaaaaagctcagcgtttactgcagcatcaagtaatcaggctagaaaat
ctggacctgatgtcaaagcatggtcctgatgtgtggaagctgcacaatcaacgactggaa
gcatttttagccagaatgcaatcacaagctgttgaactgaatgaaatgattgaaaccgta
aacagggaaaggaaatatcatcagcaaactactgcatatgagctcagtgcgttgtccatg
caatggaaagagctctgtctgaaaaatatggaaatccaatctgcttgtggggaactggaa
gaccacatagaacaactgaagaaggaggctcaagagagggactggaatttggaggctaat
gttgagaatagcaaaatgctgtatgcagaatga

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