Nicotiana sylvestris (wood tobacco): 104238783
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Entry
104238783 CDS
T05026
Name
(RefSeq) protein transport protein SEC16B homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nsy04131
]
104238783
Membrane trafficking [BR:
nsy04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
104238783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
FimL_2nd
Motif
Other DBs
NCBI-GeneID:
104238783
NCBI-ProteinID:
XP_009791559
UniProt:
A0A1U7XX59
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All DBs
Position
12:complement(4466054..4475007)
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AA seq
1515 aa
AA seq
DB search
MASNPPFLLEDQTDEDFFDKLVNDDDDDVGFNVTTPGPGLGMSSSPVYVHGIDSDEVKAF
SNLSISDDTSTRADNIREKSSGFQATTSSAEPGLGLDASQVYVDGNGSDEVKAFANLSIS
DDGNSGVDTISSDKGVNCNAKTALIVEGNGEKKSSGSLVSLASGGSDGLLESSNGNMETE
VTADKMENHTGGSGNSGVKEVGWSAFHADPVTNGDNSGFGSYMDFFSELGDTNDGDVIGN
VEENVNKRSTVVPADQVHDTKQVHETSYLDNTSSSLTQGQDGYGYDATTGQVADGHDLNS
SQYWEDLYPGWKYDANTGQWYQVDSIDSGANAQGSTDSNLVSDWAVSDGTPKVSYLQQAA
QSVSGNAAESVTTESVTNWNQVSQLSNATENVENWNQASQTIDNGGVVTDWNQVSLASDA
GGFTTDWNQASQINNGYPSHMVFDPQYPGWYYDTIALEWRSLESYTSSAQSTVQGEGQLD
QTGLASQQTFSHNDDQRNYGHKENSGFQGFSSGGGDYNWSGSFGNYNQNSSNLSQNENVA
KSYHVSEYRGSQQLENHYNQEFSTSSDVNRQMSNHYEGTVPYNAKAIQSQGNQGFFSGGG
FGQQLSQPTLQQHEQKHASSDYYGSQTTANYSQQAFQSSQQFSHALAAGRSSAGRPPHAL
VTFGFGGKLIVMKDNSSFGNQSFGSQNPVGGSISVLNLMDVVSERVDTSSLAMGACEYTR
TLCRQLFPGPLVGGSPSTKEFNKWIDERIANSESPDMDYRKGEVLRLLLSLLKIACQYYG
KLRSPFGTEAVLKESDAPETAVAKLFASVKRNGMQFNQYGAVSQCLQQLPSEGQMRATAA
EVQILLVSGRKKEALQVAQEGQLWGPALVLAAQLGEQFYGETVKQMALRQLVAGSPLRTL
CLLIAGQPADVFTVDSTVQSGMPAVNVAQQPTQFGANVMLDDWEENLAVITANRTKDDEL
VLIHLGDCLWRERSDIVAAHICYLVAEANFEPYLDTARLCLVGADHLKFPRTYASPEAIQ
RTEIYEYSKVLGNSQFILLPFQPYKLLYAHMLAEVGRISDALKYCQALSKSLKTGRTPET
ETLRQLVSSLEERIKTHQQGGFSTNLAPGKLVGKLLNLFDSTAHRVVGGLPPPMPTSGSL
QGNEQHHQFAGSRVSSSQSTMAMSSLMPSASMEPISEWAADSGRMSMHSRSVSEPDIGRT
PRQDHVDSSKEASSSNTGSNASGAGGTSRFRRFSFGSQLLQKTVGLVLKPRQGRQAKLGE
TNKFYYDEKLKRWVEEGAELPAEEPAFAPPPTTAVFQNGAPDYNLKNVLKSESSICNNGF
PEMKSPTSADNGSGIPPLPPTSNQFSARSRVGVRSRYVDTFNKGGGNPTNLFQSPSVPSI
MPATAGNAKFFVPTPMSPVEETGNSTSNEQETSSNSENDSVTTVNGSFQFHAPTSSAPMQ
RFASMDNLSNKGAGTGSLSAYSRRTASWSGSFPDASSPNKSEVKPPGSRLSMPPSSFMPS
DTNGSFGDDLHEVDL
NT seq
4548 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaatcctccatttctactggaggatcagacggatgaggatttcttcgataaa
ttggtcaatgatgatgacgatgatgttggttttaatgtaactacaccgggcccgggcttg
ggcatgagctcgagcccggtgtacgtccatgggattgactctgatgaggttaaagcattt
tctaatctcagtatcagtgatgataccagtactagagctgataatataagggagaagagt
agtggttttcaggcaactacatcgtcagcagaaccaggattgggcttggacgcgagccag
gtctacgtcgatgggaatggatctgatgaggttaaagcctttgctaatctcagtatcagt
gatgatggcaatagtggagttgatactataagcagtgataaaggtgttaattgcaatgct
aaaacagcgttaattgttgaggggaatggagagaagaagagtagtggttctttagtgtca
ttggcttctggggggtcggatggtttactcgagtcgagcaatggtaatatggagactgag
gtaacggctgataagatggagaatcacaccggtggatcaggaaactcgggtgtgaaggag
gttggatggagtgcgtttcatgctgatccagttacgaatggcgataattctgggtttgga
tcatacatggactttttcagtgaattgggggatactaatgatggtgatgtaattggaaat
gttgaggagaatgtgaataagaggtcaactgttgtgccagccgatcaagttcatgacacg
aaacaagttcatgaaacgtcgtatttggataatactagcagttcgttaacacagggtcaa
gatggttacggctatgatgctaccacaggacaagttgcagatggacatgatctaaacagt
agtcaatactgggaagatctttatccgggatggaagtatgatgcaaacaccgggcagtgg
tatcaggttgatagtattgattcaggtgctaatgcacaagggagtactgattctaatttg
gtttctgattgggcagtttctgatggaacaccgaaggtctcgtacctacagcaagctgct
cagtctgtttctggtaatgcggccgagagtgttacgactgagagtgtcactaattggaat
caggtttcccagctaagcaatgctactgagaacgtggaaaactggaatcaggcttcacag
acgattgacaatggcggggttgtgactgactggaatcaggtgtcactggctagtgatgca
ggtggtttcacgactgactggaatcaggcctcacaaatcaacaatgggtatccatcgcat
atggtttttgatcctcagtaccctggttggtattacgatacgattgcgcttgaatggcgc
tctctagagagctacacatcgtctgctcaatcgactgttcaaggtgagggccagctggat
cagactggtttggcttcgcagcagactttctctcacaatgatgatcaaaggaattacggg
cacaaagagaatagtggattccaagggtttagcagtggaggaggagattacaactggtcc
ggctcttttggtaattacaatcagaatagctcaaatttgtcgcaaaatgaaaatgttgca
aagagttaccatgtatcagagtatagggggagccagcaattagagaatcactacaaccaa
gaattttctacaagcagcgatgttaataggcaaatgtctaatcattatgagggaacagtt
ccatacaatgcaaaagcaattcaaagtcaaggtaaccaaggctttttctctggtgggggt
tttggtcagcaacttagtcagccaacacttcagcaacatgagcaaaagcatgcctctagt
gattattacgggagtcaaaccacagccaattattcccagcaagcatttcagagcagccag
cagttttctcatgctcttgctgcaggaaggtcatctgctggccgtccaccacatgcttta
gtcacttttggttttggtggaaaactgattgtgatgaaagataatagttcctttggaaac
caatcttttggaagtcagaatcctgtaggaggttcaatatctgtactcaacttgatggat
gttgtctctgagagagttgacacttcaagccttgcgatgggggcatgtgagtatacccga
actctgtgccggcaattattccctggtccactagttggtggaagtcccagtaccaaggag
tttaataaatggattgatgagaggattgcaaactctgaatctcctgacatggattacagg
aaaggcgaagttttgaggttgcttctgtcattgctaaaaatagcatgtcagtattatggg
aaacttcgttctccttttggtactgaggctgtgttaaaggaaagcgatgctccagaaaca
gcggtagcaaaattgtttgcatctgtgaagaggaatgggatgcaattcaatcaatatggc
gctgtttcccagtgcttgcagcaattgccttctgaaggacagatgcgggctactgctgct
gaggttcaaattcttctagtttctggaagaaagaaagaagcattacaagttgcacaagag
ggtcagttgtgggggccagctcttgttctcgctgcacaacttggtgaacagttctatgga
gaaacggtgaagcaaatggcacttcgacagttagtagcagggtctcctttgcggacacta
tgcctattaattgcaggtcaaccggctgatgtctttactgtagattctacagttcaaagt
ggcatgcctgctgtaaatgtggctcagcagcctacacagtttggtgctaatgtcatgctg
gatgactgggaagagaatttggctgtgatcactgcaaacagaacgaaggatgacgaactg
gtgcttattcatcttggtgattgtttgtggagagagaggagtgatattgttgctgcacac
atttgctatctagtggccgaagcaaactttgaaccatatttagatacagcgagattgtgt
cttgtgggtgcggatcacttgaaatttccccgaacttatgctagtcctgaggctattcag
aggactgagatttatgaatactcgaaggtgctggggaattctcaatttattctccttcct
tttcaaccatataaacttctgtatgcacacatgttagctgaagttgggaggatatcagac
gcattaaagtactgtcaagcattgtcgaaatcacttaaaactggccgaacccctgagacg
gaaacattgagacagttagtgtcatctcttgaggaaaggattaaaactcaccaacaggga
gggttctccacaaatttggctcctggaaaattggttggtaaattgcttaacctttttgat
agcacggctcatcgtgttgttgggggcttaccaccaccaatgccaacaagtggcagttta
caagggaatgaacaacatcatcagtttgcggggtctagagtttcaagtagtcagtcaaca
atggcaatgtcatcactgatgccctcagcatctatggagccaataagtgaatgggcagca
gatagcggtagaatgtcaatgcacagtagaagtgtttcagagcctgacattgggagaact
ccaagacaggatcacgttgactcgtcaaaggaagcaagctcaagtaacacaggaagcaat
gcatcgggagctggagggacatcacgctttcgtcgctttagctttggctcccagcttctc
cagaaaactgttggattagtcctcaaacctcgtcaaggccgccaggcaaaattgggtgaa
acgaataaattttattatgatgaaaaacttaaaagatgggtagaggaaggggctgaactt
cctgctgaggaaccggcctttgcacctccaccaaccactgcagttttccagaatggagca
ccagattataacttgaagaatgtattaaaaagtgaaagttctatatgcaacaatggattt
ccggaaatgaagagtccaacttctgctgataatggttcgggaatcccacctcttccgcct
acctccaaccaattctcggctcgtagtcgtgtgggtgtccggtcaaggtatgttgacaca
ttcaacaaaggtggtggtaatccaacaaatcttttccaatcaccttctgttccttccata
atgcctgctactgctggcaatgccaagttttttgttcccaccccaatgtctcctgttgaa
gagacggggaacagtacttccaatgagcaagaaacttcaagtaatagcgagaatgattca
gtcactactgttaatggatcgttccagtttcatgcaccaacatcaagtgcgcctatgcaa
agatttgcaagcatggacaacctctcaaataaaggagctggcactggctctctatcagct
tactcccggcgaactgcatcatggagtggaagctttcctgatgcttcctcccctaataaa
tctgaagtaaaaccaccaggcagtagattgagtatgcctccgtcatcattcatgcctagt
gatactaatggcagttttggtgatgaccttcatgaagtagacctgtga
DBGET
integrated database retrieval system
