Nicotiana sylvestris (wood tobacco): 104238829
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Entry
104238829 CDS
T05026
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4-like
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nsy04121
]
104238829
Enzymes [BR:
nsy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104238829
Ubiquitin system [BR:
nsy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
104238829
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-ANAPC11
Prok-RING_1
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
SieB
Motif
Other DBs
NCBI-GeneID:
104238829
NCBI-ProteinID:
XP_009791613
UniProt:
A0A1U7XL57
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All DBs
Position
8:complement(41903599..41905756)
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AA seq
320 aa
AA seq
DB search
MSAYYTQPPPLYFTSVGGGTIPSTAAEAHISNVKTTSSSIVIVIIVVATAIIVSASIYLL
LRLLSRRSSRTYAAAEDVISHPAAISNRLSGRLFESLPLFSFGSVTGSLTGIDCAVCLSK
FESHDQLRLLPLCCHAFHRECIDTWLLTNLACPLCRSTVAPTDADVLNKILTATNSENPT
IGTPNSNTGSFRLEIGSVSRRRVGSDSAGRRSYSIGSFEYIVEEGHELSVDSIRRSEVSD
KDLTGDPVPEPPGEGLTAEVSGGRSWLRDYVDRIASFRSSGRFFFSGSSRRSDIVVPVDD
LEAGRVGEEISEYFRWLSGV
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcctattatacacagccaccgcctctgtacttcaccagcgtcggcggtggcacg
attcccagcaccgccgcagaagcacatatttcgaacgtcaaaaccacttcttcatcgatt
gtgattgttattattgtcgtcgccaccgccattatcgtttccgcttccatttacctcctc
ctccgcctcctctcccgccgctcctcccgaacctacgccgccgcagaagacgtaatttct
catcccgctgctatttcaaatcgtctctccggtcgactgttcgagtcattgccgctgttc
agttttggttctgtgactggcagtttgactggaattgactgtgcagtttgtctctccaaa
ttcgaatcgcacgatcagctgcgtcttcttccactttgctgtcatgcgttccaccgcgag
tgcattgacacatggcttctaacaaatctggcctgtcctctttgccgctctactgtggcc
cccaccgacgctgacgtactgaacaagatattaacagcaacaaattctgaaaaccctacc
attggcactcctaatagtaataccggtagtttccgactcgaaattggtagcgtgagtcgg
agacgggtcgggtcggattccgcgggccggaggtcctattcgattggttcatttgaatat
attgttgaagaaggccacgagttgtccgtagattctattcggcggagtgaagtttctgat
aaggatttaaccggagatccggtaccagagccgccgggagagggtttaacagctgaagtt
tccggcggacggagttggctacgtgattacgttgaccggattgcatcattccgtagctcc
ggaaggtttttcttcagtggtagtagtcgccggagtgacattgtcgttccagtggacgat
ttggaggctggccgcgttggggaggagattagcgagtactttcgctggctttctggggta
tga
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