Nicotiana sylvestris (wood tobacco): 104238843
Help
Entry
104238843 CDS
T05026
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104238843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nsy04121
]
104238843
Enzymes [BR:
nsy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104238843
Ubiquitin system [BR:
nsy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
104238843
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
FAIM1
DZR
Motif
Other DBs
NCBI-GeneID:
104238843
NCBI-ProteinID:
XP_009791626
UniProt:
A0A1U7XPS6
LinkDB
All DBs
Position
6:72054119..72060233
Genome browser
AA seq
321 aa
AA seq
DB search
MEEMEMDSIECVSSSMDGIEDEEIQSSVSSHQQYSSAKPHPNVVPSGIAPTSVHELLECP
VCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYY
SLGFPEIFPYYSKLKHATLCNFRPYNCPYAGSECSVTEDIPYLVTHLRDDHKVDMHTGCT
FNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDESEARS
YSYSLEVGGNGRKLLWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVT
GRIWKEQQNPDGGVCIPNLCS
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaatggagatggatagcattgagtgtgtatcatcatcaatggatggcattgaa
gatgaagagatccaatcttctgtttcatctcatcaacaatactcttcagcaaaacctcat
cctaatgttgtaccttccgggattgcccctactagtgttcatgaattgctcgaatgcccc
gtttgtactaattctatgtacccacctattcatcagtgtcacaatggacacacgctctgt
tcaacttgcaaaacaagggtgcacaatcgatgtcccacatgcagacaagagcttggtgat
ataaggtgtttagcgctagagaaggtagcagagtcgcttgaactgccttgcaaatattat
tctttgggcttcccagaaatattcccatattacagcaaactcaaacatgcgacattgtgc
aattttagaccgtacaattgcccatatgctgggtcagagtgctcagtgaccgaagacatc
ccttatttggttacacatttaagagatgaccacaaagtggatatgcacacaggatgcaca
ttcaaccatcgttatgtaaagtctaatcctcgtgaagtggaaaatgccacgtggatgctg
acggtcttccactgtttcgggcagtatttctgtctccatttcgaggcgttccagcttggc
atggcacctgtatatatggcatttctacgcttcatgggtgatgaaagtgaggcacgcagt
tacagctacagtctagaggtaggaggaaacggtagaaagctcttatgggagggtacccca
agaagtattcgagatagccaccgcaaggtgagagacagtcacgatggtcttataatccaa
cgtaacatggcacttttcttttccggtggtgaccggaaagagctgaaacttagagttact
ggacggatatggaaggaacaacaaaatccagatggtggggtgtgcataccaaatctctgt
agctaa
DBGET
integrated database retrieval system
