Nicotiana sylvestris (wood tobacco): 104238972 Help Entry 104238972         CDS       T05026                                  Name (RefSeq) vacuolar sorting protein 18   KO K20181   vacuolar protein sorting-associated protein 18 Organism nsy  Nicotiana sylvestris (wood tobacco) Pathway nsy04148   Efferocytosis Brite KEGG Orthology (KO) [BR:nsy00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     104238972  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:nsy04131]     104238972 Membrane trafficking [BR:nsy04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     104238972    Hops complex     104238972 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pep3_Vps18 Clathrin zf-RING_11 zf-RING_Vps41 zf_RING_Vps8 RPN1_RPN2_N zf_RING_Vps8_fungal Nup54_57_C zf-rbx1 zf-C3HC4 zf-RING_UBOX zf-RING_2 Motif Other DBs NCBI-GeneID:  104238972 NCBI-ProteinID:  XP_009791804 UniProt:  A0A1U7XQB1 LinkDB All DBs Position 10:complement(101003533..101049852) Genome browser AA seq 987 aa AA seqDB search MERRHQVFSVDLLERYATKGRGAITCMATGNDVIVLGTSKGWVIRHDFGVGDSYDIDLSV GRPGEQSVHKVFVDPGGSHCIATVIGSSGADTYYTHAKWTKPRILSKLKGLVVNAVAWNR QHITEASTREIIMGTDNGQLYEMAVDVKDKMEKYVKLLFELKELPEAFTGLQMETASVHN GTRFYVMAVTPTRLYSFTGIGSLEAVFASYVDRTVHFMELPGEIPNSELHFFIKQRRAVH FAWLSGAGIYHGDLKFGVQHSSPNGDENFVENKALLDYSKFSEGVEGVKPSSLAVSEFHF LLLIGNKVKVVNRISEQIVEELYFDQTPDAVSRGIFGLCSDASAGLFYAYDQNSIFQVSV NDEGRDMWKVYLDLKEYAAALANCRDALQRDQVYLVQAEAAFAAKEFLRAASFYAKINYV LSFEEISLKFISIGEQDALRTFLLRKLDNLSKDEKCQITMISTWATELYLDKINRLLLED DSALDSNNTEYQSLIKEFRAFLSDCKDVLDEATTMKLLESYGRVDELVFFASLKEQYEIV LHHYIQQGEAKKALQVLQKPNVSMELQYKFAPDLIMLDAYETVESWMTTKSLNPRKLIPA MMRYSSEPHAKNETHEVIKYLEYCVHRLQNEDPGVHNLLLSLYAKKEDESALLRFLECKV GKGQPGGPEFFYDPKYALRLCLKEKRMRACVHIYSMMSMHEEAVALALQVDPELAMAEAD KVEDDEDLRKKLWLMIAKHVIEQEKGTKRENIRKAIAFLKETDGLLKIEDILPFFPDFAL IDDFKEAICSSLEDYNEQIEKLKQEMNDATRGADNIRNDISALAQRYTVIDWDEQCGVCR RKILNVGGDYRMTRGYMAVGPMAPFYVFPCGHAFHAQCLIAHVTRCTNQAQAEYILDLQK QLTLLCAESKNVSNGGLSEEPLVSVTPMHKIRSQLDDAVASDCPFCGDLMIQEISLPFIP PEEAEESESWEIKPHNHPSQRSLSLAV NT seq 2964 nt NT seq  +upstreamnt  +downstreamnt atggaaagaagacatcaggttttctctgtagatcttcttgaaagatatgccacaaaaggc cgtggagccattacatgcatggcgaccggcaatgatgtcatagttctgggaactagcaaa ggctgggtaatcagacatgactttggagtgggtgattcttatgatatagatctttctgtt ggcaggcctggggaacaatctgttcataaggttttcgttgaccctggagggagtcactgt attgccactgttattggcagtagtggtgccgatacatattatactcatgctaaatggaca aagcctcgaattttaagcaaattaaaaggtcttgttgtcaatgctgttgcctggaataga caacatataacagaagcttcaactagagaaatcattatgggtacggacaatggtcaactt tatgagatggctgtagatgtaaaggataaaatggagaagtacgtaaagttactgtttgaa cttaaagaactacctgaggctttcaccggtttgcagatggaaacagcaagtgtgcacaat ggtaccagattttatgtgatggctgttacacctactcgactttattcgttcacagggatt ggctcgcttgaagctgtttttgcaagctatgtggaccgtacagttcatttcatggaactt cctggtgaaatacctaatagtgaactgcacttttttatcaagcaaaggagggctgtacac ttcgcatggctttctggagcaggaatctaccatggtgacctaaaatttggagtgcaacat agttcgccaaacggggatgaaaactttgtggaaaacaaagctcttctggactactctaaa ttctctgaaggagttgaaggtgtcaaacctagctctctggctgtatccgagtttcatttc ctacttctcataggtaacaaggttaaggtggtgaaccggataagtgaacaaatagtagaa gaactttattttgatcagacacctgatgcagtttcaagaggtatttttggcttatgtagt gatgcctcagctgggttgttttatgcatatgaccaaaattccatcttccaggtgtctgta aatgatgaaggccgtgacatgtggaaagtgtacttggacttaaaagaatatgctgcagct ttggctaattgtcgtgatgccctgcagagagaccaagtttatctggttcaggctgaagct gcttttgctgccaaggagttcctcagagctgcatcattctatgcaaaaattaactatgtg ttatcatttgaagagatctcattgaagttcattagcataggtgaacaggatgcattgaga acatttctcctgcggaagcttgataatctttcaaaggatgaaaagtgccaaataacaatg atttccacatgggcaactgaattatatcttgataagatcaatcggctgcttctggaagat gacagtgcattggacagtaataataccgagtaccaatcactcattaaggagtttcgtgct ttcctaagtgactgcaaggatgtattggatgaagcaaccacaatgaagctactggaaagc tacggtagggttgacgaattagtgttctttgctagtctaaaggagcaatacgaaattgtg cttcaccactacattcagcaaggagaagcgaagaaggcgttacaggttcttcagaagcct aatgtttcaatggaacttcagtacaagtttgcgccagacctcatcatgcttgatgcatat gaaactgttgagtcatggatgaccactaaaagtttgaacccgagaaagctcattcctgca atgatgcgttattcaagtgaaccacatgcaaagaatgaaactcatgaagtaatcaagtac ctggagtattgtgttcatcgtttacaaaatgaggatcctggcgttcacaatctgttactt tccttatacgccaaaaaggaagatgagagtgctcttctgcgtttcctagaatgcaaggtt ggtaaagggcagccaggtggccctgaattcttttatgatcccaaatatgcgcttcgcctt tgcctcaaggaaaagagaatgcgagcttgtgttcatatatacagcatgatgtctatgcat gaagaagcagttgctctagcactacaggttgatccagagcttgcgatggctgaagcagac aaggttgaagatgatgaggacttgaggaagaagctttggcttatgattgctaagcatgtc attgagcaggaaaaaggaaccaaaagggagaatataagaaaggcaattgcttttctcaag gaaactgatggtctattaaagattgaggacatcttacccttcttcccagactttgctcta attgatgacttcaaggaagcaatttgctcatccttagaggattacaacgagcaaattgaa aaattaaagcaggagatgaatgatgcaactcgtggtgccgataacattagaaatgacatc agcgctcttgctcagcgatatactgtcattgattgggatgagcaatgtggggtttgtcga cggaaaatattaaatgtgggtggtgattatcgaatgactagaggttatatggctgttgga ccaatggctcccttctatgtctttccgtgtggtcatgcgtttcatgcacaatgcctgata gctcatgtgactaggtgtactaatcaagctcaagccgaatacattctggatctgcagaag caacttactttactttgtgctgaatctaagaatgtgtcaaatggtggcttgtctgaagaa ccactagttagcgtgactcccatgcataagatccggtcacagctggatgatgctgtagcc agtgattgcccattttgtggtgaccttatgatccaggaaatttctttgcctttcatccct ccagaagaagcagaagaatctgaatcgtgggagataaaaccacataatcatcctagtcag agaagcctttccctggctgtgtga

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