Nicotiana sylvestris (wood tobacco): 104239129
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Entry
104239129 CDS
T05026
Name
(RefSeq) chloride channel protein CLC-c-like
KO
K05016
chloride channel 7
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nsy01009
]
104239129
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nsy04131
]
104239129
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nsy04040
]
104239129
Protein phosphatases and associated proteins [BR:
nsy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104239129
Membrane trafficking [BR:
nsy04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
104239129
Ion channels [BR:
nsy04040
]
Chloride channels
Chloride channel (CLC)
104239129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
TAT_signal
Motif
Other DBs
NCBI-GeneID:
104239129
NCBI-ProteinID:
XP_009791971
UniProt:
A0A1U7XQR9
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Position
1:complement(121454996..121462336)
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AA seq
780 aa
AA seq
DB search
MEDQGDIENEGGGIGVMIMENGKDLERNISAVSESGVRQPLLSSKSRVNNTSQIAIIGAN
VCPIESLDYEIIENDLFKQDWRSRKKVQIFQYIFLKWTLVLLIGLSVGLVGFFLNIAVEN
IAGFKLLLISDLMLQDKYFRGFAAYACCNLVLATCAGILCAFIAPAAAGSGIPEVKAYLN
GIDAHSILAPSTLFVKIFGSALGVSAGFVVGKEGPMVHTGACIANLLGQGGSRKYHLTWK
WLKYFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEVASWWRSALLWRTFFSTAVV
AMVLRSFIVFCRSGKCGLFGQGGLIMYDVNSGAPNYNTIDVLAVLLIGVLGGLLGSLYNY
LVDKVLRTYSIINERGPAFKVLLVMTISILSSLCSYGLPWFATCTPCPVGLEDKCPTIGR
SGNYKNFQCPAGHYNDLASLFMNTNDDAIRNLFSSDNSSEFHLSSLFVFFAGVYCLGVVT
YGIAIPSGLFIPVILAGASYGRFVGTVLGSISNLNNGLFALLGAASFLGGTMRMTVSICV
ILLELTDDLLMLPLVMLVLLISKTVADCFNHGVYDQIVKMKGLPYLEAHAEPYMRQLVAG
DVCSGPLITFSGVEKVGNIIHALKFTRHNGFPVIDAPPFSDAPEFCGLALRSHLLVLLKA
KKFTKLSVLSGSSILRSFHAFDFAKPGSGKGPKLEDLSFTDEEMEMYVDLHPVTNTSPYT
VVETMSLAKAAILFRQLGLRHLCVVPKKTTGRDPIVGILTRHDFMPEHIKGLYPHLVHHK
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggaagatcaaggtgatatagagaatgaaggaggaggaattggggtgatgataatggag
aatggcaaagatttggagaggaatatttcagcggtttctgagagtggtgttagacagcca
ttgcttagttctaaaagcagagtcaataatacctcacaaattgctattataggagccaat
gtttgccccattgaaagtcttgattatgagattattgaaaatgaccttttcaagcaagat
tggagatctaggaaaaaagtccagatatttcaatatatattcctaaagtggacacttgtg
cttcttattggattgagtgtagggcttgttggtttctttttaaacatagcagtggaaaat
attgctggcttcaagcttctgctcattagtgacttaatgcttcaggacaagtatttccgt
ggatttgctgcttatgcatgttgcaatttggttcttgcgacttgtgctggaatcctatgt
gcatttattgcaccagcagctgcagggtcaggaatacctgaagtgaaagcatatctcaat
ggtatcgatgctcattccattttagctccaagtactttatttgtgaagatatttggttct
gctttgggtgtttctgctggatttgttgttggcaaggaaggacccatggtccatactggc
gcttgcatagcaaacttgcttggacagggcggctcccgcaagtatcatctgacttggaag
tggctgaagtatttcaaaaatgaccgtgaccgtagagatttgatcacttgtggtgctgca
gctggtgttgcagctgctttccgagccccagtcggtggtgttctttttgctcttgaagaa
gtagcctcatggtggcgaagtgctcttctttggaggaccttcttctcgactgctgtagta
gctatggtgctcagatctttcattgtattctgtcggagcgggaaatgtggactatttggt
caaggaggtttgataatgtatgatgtgaattcaggagcacctaattataacactatagat
gtactggcagtgttgttaattggagttcttggaggccttctcggaagcctttataattat
ctagtggacaaggtcctccggacttacagcatcattaatgagaggggtcctgctttcaaa
gtcttgctcgtaatgaccatttcaatcctgagttctctttgctcgtatggtctaccgtgg
tttgcaacttgcacaccatgtcctgtaggcttggaggacaagtgccctactataggtcgc
tctggaaactataagaatttccagtgtccagcggggcattacaatgatctagcctccctg
tttatgaataccaatgatgacgccatccgcaatttgtttagctcagataattccagcgaa
tttcacctctcttcgctttttgtcttctttgctggggtatattgccttggcgtcgttact
tatggaattgctattccctctgggctattcattcccgtcatacttgccggtgcctcctat
ggacgttttgttgggactgtcttgggttcgatatccaatcttaataacggcctctttgct
ctccttggtgctgcttccttcctcgggggtactatgaggatgacggtatccatctgtgtc
atactacttgagctcaccgatgacctgctaatgcttccattggtgatgcttgtgctcctt
atttcaaagactgtggctgattgttttaaccatggtgtctatgaccagattgtgaaaatg
aaaggcttgccttatttggaagcacacgccgaaccatacatgaggcaattagttgcagga
gatgtttgttcagggcctttaattacattttcaggtgttgagaaggtagggaacataata
catgctttgaagtttactagacacaatgggtttcccgtgattgatgcaccgccattctca
gacgcgccagagttctgtggacttgctttaaggtcacacctacttgttttgctcaaagca
aagaaattcacgaaactaagtgtattgagcggctccagtattttgaggagttttcatgcg
tttgatttcgctaagccaggatcggggaaggggcctaagctcgaggatttgtccttcacc
gatgaggagatggaaatgtatgtagatctccatcctgtcacaaatacatctccatacaca
gtagtggaaaccatgtctctggccaaagctgcaatcctttttcgacaacttggtctgaga
cacttgtgtgttgtaccaaaaaagactaccgggagggatccaatagttggaattttgaca
aggcatgactttatgccagaacatataaagggactgtacccacatttggtccatcacaag
tag
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