Nicotiana sylvestris (wood tobacco): 104239234
Help
Entry
104239234 CDS
T05026
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nsy04131
]
104239234
04121 Ubiquitin system [BR:
nsy04121
]
104239234
Enzymes [BR:
nsy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104239234
Membrane trafficking [BR:
nsy04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
104239234
Ubiquitin system [BR:
nsy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104239234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
Anti-TRAP
zf-RING_16
zf-RING-like
zf-RING_Vps41
DZR
Prok-RING_1
Tsi3
Motif
Other DBs
NCBI-GeneID:
104239234
NCBI-ProteinID:
XP_009792116
UniProt:
A0A1U7XR65
LinkDB
All DBs
Position
3:164679282..164682520
Genome browser
AA seq
398 aa
AA seq
DB search
MSSPGTFGSGGGGGGATGNQPQNYHCYQCEQTVTITPSPNSELTCPNCNGTFLEESETAP
PPSNPNNPDNFPFFSAATTDDLPFGGGGFPIVFSSSAASPAGGAVAFDDLSALLSGIAGG
AGGAAFPSRSPNQFDPFAFLNNYMSTMRAGGANIQLVFENHPGGSGGGEFRFPGNFGDYF
HGPGLEQLIQQLAENDPNRYGAPPAAKSAVAGLPDIKITVELLDSDSSQCAVCKDTFELG
EDAKQMPCKHIYHKDCILPWLELHNSCPVCRYELPTDDPDYENRRTSQQQNANSNANNSN
NNNTNNNNNTGWIFGGSEGGGGNQENSQTPRTVEGRLRIPLQWLFRGLGSPAETSNSGGA
SGNDTNNRNNDNNHTSNNSRGGESNPGSGGQARQEDLD
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgcccggaacttttggtagcggtggaggaggaggcggtgctaccggcaatcaa
ccgcagaattatcactgctaccaatgtgaacagacagttaccattacgccatcgccaaac
tccgaactcacatgccctaattgcaatggtacgtttctagaagaatccgaaaccgctcca
ccaccttctaaccctaataatcccgataattttcccttcttctccgccgccactaccgat
gacctccccttcggcggcggtggctttccgattgttttctcctccagtgccgcttcccct
gccggcggtgccgtcgctttcgatgatctctccgcgctattgagcggtatcgctggtggt
gccggcggtgccgccttccccagtcgatcccccaatcaattcgatcctttcgctttcctc
aacaactatatgagtactatgagggccggtggtgctaatattcagttagtcttcgagaac
catcctggcggtagcggtggtggtgagtttaggtttccggggaatttcggtgactatttc
catgggcctgggctggagcaattgatccaacagcttgcggagaatgatccaaatcgttac
ggggcacctccagctgcgaaatcggctgttgctgggcttccggatattaagatcacagtg
gagttgttggattcggattcatctcaatgtgctgtttgtaaagatacttttgaactcggt
gaggatgcaaagcagatgccttgcaaacatatataccacaaggactgtatattgccatgg
ctggagttgcataattcttgccctgtttgtcgctatgaattgcccaccgatgatcctgat
tacgagaataggagaacatcacaacagcagaatgcaaattcgaatgccaataatagtaac
aataacaatacaaacaacaacaataatactggttggatatttgggggttcagaaggtggt
ggggggaatcaggagaattctcagacacctaggacagttgagggcaggcttaggatacca
ttacaatggcttttcaggggacttggatcacctgctgagacgagcaatagtggaggagcg
agcggcaatgatactaacaatagaaacaacgacaacaaccatacgagcaacaattctcgt
ggtggggagtcaaatccaggttctggagggcaagcacggcaggaggatctcgattaa
DBGET
integrated database retrieval system
