Nicotiana sylvestris (wood tobacco): 104239638
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Entry
104239638 CDS
T05026
Name
(RefSeq) transcription elongation factor SPT4 homolog 2-like
KO
K15171
transcription elongation factor SPT4
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104239638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsy03021
]
104239638
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104239638
Transcription machinery [BR:
nsy03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
104239638
RNA polymerase I system
104239638
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
104239638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
HIPIP
Motif
Other DBs
NCBI-GeneID:
104239638
NCBI-ProteinID:
XP_009792618
UniProt:
A0A1U7XNZ3
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All DBs
Position
4:25117163..25121128
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AA seq
117 aa
AA seq
DB search
MGSQQAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDYERVGDCTTSNF
TGLISVMDPTRSWAARWLRIARSVPGCYTLAVSEALPEDLQNLCQDERIPYNPPKRI
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgggaagccaacaagcagcacaaattccgaccagttttgggcatgagctgagggcttgt
ctccgttgccgccttgtcaaaacctacgaccagtttagggaatcaggatgtgagaactgt
ccctttttcaagatggatgaagattatgaacgtgtaggggactgtactacttctaatttt
actggtttgatctccgtcatggatccaactaggagctgggcagcccggtggcttagaatt
gcacgatctgtccctggttgttacacgcttgctgtgtctgaggcacttccggaagatttg
cagaatctatgtcaagatgaacgtatcccatataatcctccaaaacgcatctga
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