Nicotiana sylvestris (wood tobacco): 104239698
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Entry
104239698 CDS
T05026
Name
(RefSeq) protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1-like isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104239698
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104239698
Surveillance factors
Other surveillance factors
104239698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
DUF5321
Motif
Other DBs
NCBI-GeneID:
104239698
NCBI-ProteinID:
XP_009792709
UniProt:
A0A1U7Y0E6
LinkDB
All DBs
Position
11:complement(103490009..103498752)
Genome browser
AA seq
1566 aa
AA seq
DB search
MAKSKLDLPDDLLSSKDTSAGNYDDKSFLVSIDDSKDQAVVDSNIPLSPQWLYVKPSDSK
MEMRAPSSLSLGSSADSNQKDAWRSDVPDEKKDWRRPTAETESGRRWREEERETGLLGRR
DRRKPDRRAENAPAKETTDARALPASDRWHDVNNRNLGHDTRRDTKWSSRWGPEDKEKEA
RNERRIDVDKDEVHNEVQTFGANRTVSERESDTRDKWRPRHRLEGSSGALGSYRAAPGFG
GEKGRVEGSNVGFTMGRGRSSVAILKPSGCAIGAAQFDNSVPGKPSISTHTYCYPRGKIL
DIYRRQKLEQSFCSLPVNMEEAPPITQLSITEPLAFVVPDSAEEAILNDIWQGKITSSGV
MYNSYRKGRSTDNVTEIGDGEFSDGKQGILSADIIEETGDMFPKTLNDVEESNVNSLFCG
NDVNVILGEGDANHEVQKEKVFEDIARDDTLLTNKRADNIGSLKDSSTQLDHSEIKLPDY
AATRHPLFESIEQNVAFDVNAKLPDNSNSIYIMPSDINNSRHSGIENQLERDIPPEELSL
YYCDPQGEIQGPFLGVDIISWFEQGFFGTDLLVRVEGAPEDSPFYELGDVMPHLKFGHMY
ASNMDLPKVDQPAVLEGKLESGLRSSVSELFSSAPLDGLSWPSSDFDGLSAQRFQSKVPD
LSYSQSEDFNEFVGQNEESSFPGRPGSRGNPIGKTLRGPTDLSNTNHPIPSELMEPGAPS
QKDKMHPLGLLWSELEGTSRRNDQIPNVPFSGGGQDQILNPVAARVAPFGSRTESTSTAE
MWDAYRRNAPSDLNLYQDAMDAHRLSHMDREPNHFELAEKLFSQQLQQHPHSLLSAHNSH
LNEAMLERGASHNSVHHPQVASQIEQDLERVMALQLQHQRQLQLQQHQQMQQQQQFHQQQ
MLLKEQQQSHARQLLLEQLLQSQMSDTNRAQSRLDATRPNNALEQVLMKQQILTELQRSH
LHPRHTEPSIEHLIQAKLGQMPHQGHQNDLMELVSRAKHGQMHPLAHQILQQEQLHSRQL
PVGLRQQLEMEEDRHSGSVWPVDEAGQFLRIPTDAHRSNSGFGPLDFYQQQQVPSPEEHL
SHLERNLSVQDRFAHGLYDSGLLPFERSMSLPVGGPGVKMDVANPLVQQQSLEMQDLNSR
MHSGAQMAGFSNDVYSQSPHQHLVPNQFHALHPDTIEKHWSKSNGQIPMDWMESRMKQLN
LNSEREKKDFDVKQVSEDPSMWMSAGMNDDSSKRLLLELLHPKYGQQSTEQAEMPNGISH
EIPSGHVLGTNSANRSINPLLNQDMSQNQTFSVGSFGSTSGMLPQRDLVDERSHVLAGGE
RLSHKSHSGALAEANPLFSSISDASQRHSEARENTVEQAGLTAITGDIPVNILRRPTSLG
TGGGNVGLYDDKIGTGDSLPEEPAKERVSAMTSKRPENILLKRPPVSRVSSNLEGFSELT
SDSLVRGKNPSNAMVSEGGKVEVGGNTANQAADIVTPGKKDVRFRRTASCSDSDVSETSF
SDMVKSSAKKPTAQEAHASESSDGTQGARSGSKKKGKKGRQIDPALLGFKVTSNRIMMGE
IQRIED
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaagcaagctcgatctcccggacgatctcctttcttccaaagacacatctgca
ggtaattatgatgacaagtcattcttggtgtcgattgacgattcgaaagatcaagcagtg
gtggacagtaacattcctttgtctccccagtggctttatgtgaaaccaagtgactctaag
atggaaatgcgtgcaccaagttctctctcacttggaagttctgctgattcaaatcagaag
gatgcttggcgttcagatgtgcctgatgaaaaaaaagattggagaagacccacagcagag
acggagagtggtcgccgatggcgtgaagaagagagggaaactggcttgcttggtagaaga
gatcgtaggaaaccagatcgccgtgctgaaaatgctcctgccaaagaaaccacagacgct
agagctttacctgcttctgacagatggcacgatgttaataatcgcaatttggggcatgac
acaagacgtgataccaagtggtcctctaggtggggtcctgaagacaaagaaaaggaagca
cggaatgagaggaggatagatgtagataaggacgaagttcataatgaggttcaaacattt
ggtgctaaccgtactgtgtccgagcgggagtcggatactcgagataagtggagaccacgg
catagattggagggtagctctggtgctcttggttcctatcgtgctgctccaggatttgga
ggggagaaaggaagagtcgaggggtcaaatgtgggatttaccatggggcgtgggagatct
agcgtggccattttaaaaccttctgggtgtgcaattggggctgcacaatttgacaattct
gtccctggaaaaccaagcatctcaactcacacatattgttatccgcgggggaagattttg
gatatataccgcaggcaaaagctggagcaatctttttgtagcttgcctgtaaatatggaa
gaagcaccccctatcactcaactaagtatcactgaaccattagcttttgttgttcctgat
tctgcggaggaggccatccttaatgatatatggcaaggtaaaattactagtagtggtgtg
atgtacaattcttacagaaagggccgatcaacggataatgttacagaaataggggatggc
gagttttccgatggaaaacagggcattctctctgcagacatcattgaggagacaggggat
atgtttccaaaaacgttaaacgatgtagaagagtcaaatgtcaatagccttttctgtgga
aatgatgtcaatgtcatattgggtgaaggggatgcaaatcatgaagtacaaaaagagaaa
gtttttgaagatattgctagggatgacactttgttgaccaataagagagctgacaacata
ggcagcttgaaagatagtagtactcaacttgatcattctgaaatcaagttacctgattat
gcagcaactaggcaccctctctttgagagcattgaacagaatgttgcttttgatgtcaat
gcaaagcttcccgataattcaaattctatatatatcatgccctctgatatcaacaactca
agacacagtggtattgaaaaccaattagagagggatatcccacctgaggaattgagtttg
tattattgtgatcctcagggagaaattcagggaccatttcttggagttgacatcatatca
tggtttgagcaaggattttttggaactgacttactggttcgtgtggaaggtgctcctgag
gattcacctttctacgaattgggtgacgtaatgccgcatttaaaatttggacatatgtat
gccagtaatatggatctccctaaggttgatcaacctgctgtattagaggggaagctggag
tctggtttacgcagttctgttagtgagcttttttcttcagctccccttgatggattaagc
tggccatcatctgattttgatggtctttctgcacagcgttttcagtcaaaagtacctgat
ctgtcatattctcaaagtgaagactttaatgaattcgttggtcaaaatgaagaatcttcg
tttccaggtagacccggaagtagaggcaatcctattggaaaaactttgaggggccccact
gatctttcgaataccaatcatcccattcctagtgaattaatggagcccggggctccgagt
cagaaagataaaatgcacccacttggtttgttatggtccgagctcgaaggcacttcaaga
aggaatgatcaaattccaaatgttccttttagcggaggtggtcaggatcaaattctaaac
cctgtagctgcaagggttgccccttttggttcaaggaccgagtcaacttctactgcagaa
atgtgggatgcttatagaagaaatgctccttctgacttgaacttatatcaagatgccatg
gatgctcaccgcttgtcgcacatggaccgggaaccaaatcattttgaattggcagaaaag
ctgttctctcagcaacttcaacaacatccacatagtttactgtctgctcataacagccac
ttgaatgaagcaatgctggaaagaggggcaagccataattcagtacaccacccacaggtt
gccagtcaaattgagcaggatttggaacgcgttatggcccttcagctgcagcaccagaga
cagctgcagcttcaacaacatcagcaaatgcagcaacagcaacagttccatcaacagcag
atgctactgaaagaacaacaacagtctcatgctagacagttgcttcttgaacaattgttg
cagagtcaaatgtctgatactaaccgtgcacagtcacgtcttgatgctacaaggcctaac
aatgccctggaacaggttttgatgaagcagcaaattctaactgaactacaacgctctcac
cttcatccaagacatactgaaccatcaattgagcatctcattcaggctaaacttggtcaa
atgccacatcaagggcatcaaaatgatttaatggagctcgtatcacgagcaaaacatgga
cagatgcaccctttggctcatcaaattcttcagcaagaacaattgcatagcaggcagttg
cctgttggattaaggcaacaattggaaatggaggaagacaggcattctggttctgtatgg
cctgtagatgaagctggtcagtttctccgaatcccaactgatgctcatcgatccaactct
ggatttggaccattagatttttaccaacagcaacaggtgccatctcccgaagaacattta
agtcaccttgaaaggaatttgtctgtacaagatagattcgcacatggtctctatgactct
ggattattgccgtttgaacgatcaatgtcattaccagttggtggtcctggagtaaaaatg
gatgttgcaaatccacttgtgcagcaacaaagtttagaaatgcaagatctgaattcaaga
atgcattcaggtgctcagatggctgggttctcaaatgatgtctactcgcaatctcctcac
cagcatttggttccgaaccagtttcatgctttgcatccagataccattgaaaaacattgg
tctaaaagcaacggtcagatacctatggattggatggaatctcgaatgaagcaactgaat
ctcaatagtgaaagggaaaaaaaggattttgatgtcaaacaggtttctgaagatcctagt
atgtggatgtcagctggtatgaatgatgacagttcaaagcgattgcttttggaactgctt
catcctaaatatggccagcagtcaactgagcaagcagaaatgcccaatggaatttcacat
gagataccgtctggtcatgttcttgggacaaattcagcaaaccgctcaattaatccccta
ttgaatcaggatatgagtcaaaaccaaaccttctctgtagggtcgttcggttctacttca
ggtatgctaccacagagagatcttgtggatgagaggtcccatgttcttgctggtggtgaa
agattgtcccacaaatctcattctggagcgttggctgaagctaatcctctcttttctagc
atcagtgatgcctcccagaggcactcagaggctcgagaaaacactgtcgagcaagctggt
ctgacggctataacaggggacatcccagtaaacattctccgcaggcctacttcacttggg
actggaggtggtaatgttggcttgtatgatgacaagataggtacaggtgactctttgcca
gaggaacctgctaaggaacgagtgtctgcaatgacatcaaaaaggccagaaaacattttg
ctgaagcgtccacctgtctcgcgagtgtcatctaacctggaagggttttctgaattgact
tctgattcacttgttagagggaaaaatccttcgaatgccatggtttctgaaggggggaaa
gtagaagttggaggtaacacagcaaatcaagccgctgacatagtgacacctggaaagaaa
gatgtgcgctttcggcgaactgcctcatgtagtgattctgatgtttctgagacatcattc
agtgacatggttaagagtagtgcgaagaagccaacagcccaggaggctcatgcttcagaa
tcatcagatggaacacagggtgcccgtagcggcagcaagaaaaaagggaagaaaggaaga
caaatcgatccagctcttcttggattcaaggtcacaagcaatcgcatcatgatgggtgag
atacagcggatagaagattag
DBGET
integrated database retrieval system
