Nicotiana sylvestris (wood tobacco): 104240079
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Entry
104240079 CDS
T05026
Name
(RefSeq) adagio protein 3
KO
K12116
flavin-binding kelch repeat F-box protein 1
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
104240079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nsy04121
]
104240079
Ubiquitin system [BR:
nsy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
104240079
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Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Kelch_3
Kelch_2
Beta-prop_ATRN-LZTR1
Kelch_5
Kelch_1
PAS_9
Kelch_6
NANM
PAS
F-box-like
PAS_3
F-box
PAS_4
Motif
Other DBs
NCBI-GeneID:
104240079
NCBI-ProteinID:
XP_070018540
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Position
11:complement(87821964..87834027)
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AA seq
638 aa
AA seq
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MGVKKMEGGGKRLKCTRNDNNNMDQDEEEEEEEGEIFYDDYEVGRENEQVPSSQQPVGFF
YPLTTPSSIVVSDALEPDLPIIYVNTVFEISTGYRADEVLGRNCRFLQFRDPRAQRRHPL
VDPVVVSEIRRCLEEGVEFQGELLNFRKDGTPLVNRLRLAPIHGDDGTVTHVIGIQIFSE
AKIDLNTVSYPVFKETCQPQCDKSSKYSIKSGDLLQCQHREICGILHLSDEVLAHNILSR
LTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGADVTGVLEHMTKRLAWGRLARELTT
LEAVCWKKLTVGGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWR
RVSVKSSPPGRWGHTLSCLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWKEVSGGTPP
LPRSWHSSCTMEGSKLVVSGGCTDAGVLLSDTYLLDLTIDKPTWREIPTTWAPPSRLGHS
LSAYGKTKILMFGGLAKSGHLRLRSGESYTIDLEDERPQWRQLECGAFTGVGSQNAVIPP
PRLDHVAVTMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPLWKTLNVPGQPPKFAWGHS
TCVVGGTRVLVLGGHTGEEWILNELYELCLASKQDSDA
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgaagaaaatggaaggaggaggaaagagattgaaatgcaccagaaatgataac
aataacatggaccaagacgaagaagaggaagaagaagaaggagaaatcttttatgatgat
tatgaagtaggaagggaaaatgaacaagttccttcttcacagcagccagttggatttttc
taccctttaacgacgccgtcttctatcgtcgtttctgatgccttagaacctgatcttcct
atcatatatgtgaatactgtgttcgaaatttctactggttatcgcgctgatgaagtcctc
ggtcgtaactgtcggtttttacaatttagagatccacgagcccaaaggcggcatcctttg
gtggatcctgttgttgtttctgagatcagaagatgtcttgaagaaggtgttgaattccaa
ggggagcttctcaactttagaaaggatggtacacctctggtgaacaggctaaggctagca
ccaatacatggtgatgatggcacagttacccatgttatagggattcaaatattttctgaa
gcaaaaattgacctgaatactgtgtcatatcctgttttcaaagaaacttgccagcctcaa
tgtgacaagtctagcaaatactctattaaaagcggtgatttactgcaatgtcagcaccgt
gaaatatgtggtattcttcatctctctgatgaagtgctagctcacaacattttatctcgg
ttgacaccaagggatgttgcgtccattggctctgtttgcagaaggatacgtcaattgaca
aaaaatgaacacgtgagaaaaatggtttgtcaaaatgcatggggagcagatgtcacagga
gtgctggaacacatgactaaaagattagcttgggggcgcctggctagggagctaaccact
cttgaagccgtttgttggaagaaactgacagttggaggggctgtagagccttcacgttgc
aatttcagtgcatgcgctgcagggaaccggctggtgttatttggaggggaaggtgttaat
atgcagccaatggacgatacatttgttctcaatcttgatgctgctaatccagagtggcga
cgagttagtgtcaaatcatctccaccaggacggtggggccatactctctcgtgccttaat
ggttcctggttggtggtatttggtgggtgtgggaggcagggactgcttaatgatgtgttt
gttcttgatttagatgctaaacagccaacatggaaagaagtatctggtggaactccgccc
cttcctagatcctggcacagctcatgcacaatggaaggctcaaagttagttgtttctggt
ggctgcacagatgcaggggtgctcctcagtgatacatatttgttggatctcactattgac
aagcctacatggagagaaattccaactacgtgggctcctccatcaagattgggacactca
ctctcagcttatgggaagacaaaaattctaatgtttggtggacttgccaagagtggtcac
ttgcggttaagatcaggggaatcatacacgattgacttggaggacgaaaggccacagtgg
aggcaacttgagtgtggggcgttcacaggagtaggaagtcagaatgctgtgattcctcct
cctagacttgatcacgtcgctgtaaccatgccttgtggccggattatcatttttggaggt
tcaattgccggactgcactctccttcacaactatttttattggatccttctgaggaaaaa
ccgttatggaagactctcaatgtacctgggcaacctccaaagtttgcttggggtcatagc
acatgtgtggttggaggaacaagggtcttggtcctgggaggccatacgggggaagaatgg
attctaaacgaattgtatgaattgtgcttagcgagcaagcaagattctgatgcatga
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