Nicotiana sylvestris (wood tobacco): 104240256
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Entry
104240256 CDS
T05026
Name
(RefSeq) amino acid transporter AVT1A isoform X2
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
104240256
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nsy02000
]
104240256
Transporters [BR:
nsy02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
104240256
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Paralog
GFIT
Motif
Pfam:
Aa_trans
Trp_Tyr_perm
DUF8641
Motif
Other DBs
NCBI-GeneID:
104240256
NCBI-ProteinID:
XP_009793348
UniProt:
A0A1U7XR14
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Position
12:complement(50483677..50534873)
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AA seq
620 aa
AA seq
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MAKKSEELSEYLSDDVEANPSSDSLTMSDDDEETADEEGQISPFSSQQWPQSFRETIDSY
TIAASPSFGLLRLGSSIISEVDSREFLGSDVKTHLLAEKEKVQEQNVVDGISVAKASWSE
KASSLHEQLVGELPISYGCSLTQTIFNGVNVMAGVGLLSTPYTVKEAGWASLLVLVIFAV
ICWYTASLMSHCFKSREGITTYPDIGEAAFGKFGRVIISIILYIELYSYCVEYIILEGDN
LTTLFPGTSLNWEGLKLDSTHFFGILTALVVLPTVWLRDLRVISYLSVDGVGFHNTNRVL
NWSGIPFAIGVYGFCFSGHSVFPNIYQSMADKSKFNDAVAICFILCILIYGGVAIMGYLM
FGQSTLSQITLNMPEDSIASRIAVWTTVINPFTKYALLMNPLGRSIEELLPPRISSSFLC
FILLRTVLVFSTLCVAFLIPFFGLVMALIGSLLSILVIWRSSNLAYSNLIMFLSLQISAT
IMANTQLVITFVPLLLLTFLHAHSNSVFQSPMLLLYPSHEHSLDHICFVMVHSKNKWLKD
SRLCQQNAQAAGIWIPIFNSLSTIASLCCAASHMVNLYLGCIFVCNIKLFHSALGYTGIS
FKYIYLIWNFVLVHIVCSLL
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaagtctgaagaattatcagaatacttatcagatgatgtggaagccaatcca
agtagcgatagccttactatgagtgatgatgatgaagaaactgctgatgaggagggtcaa
atatcaccattttcttctcagcaatggccccaaagtttcagagagacaattgactcatat
acgattgccgcatcaccaagtttcggactcctacgacttggatccagtattatatctgaa
gtcgatagtagagagttcttaggctcggatgtgaagacacatttactcgctgaaaaggaa
aaagttcaggagcaaaatgtcgtggatggaatctcagtggcaaaggcatcttggtcagag
aaggcttcttcattgcatgaacaactggttggggaattaccaatttcctatggatgcagc
ttaactcagactatattcaatggtgtcaatgtcatggctggagttggactgctctctact
ccttatacagtgaaagaagctggttgggctagtttgttagtgttggtaatttttgcagtt
atatgttggtacacagcttctcttatgagtcattgcttcaagagcagggaaggaatcaca
acctatcccgatattggagaagctgcatttggaaaatttggacgcgttattatatctatt
atcttgtacattgagctctattcatattgtgtagaatatataattttggaaggagataac
cttactactctttttcccggaacttcactaaactgggagggccttaaacttgattcgact
cacttctttgggatcctgactgccctagttgttctgccaactgtttggttgagggacctt
cgtgtaatatcatacctctcagtggatggagtcggatttcataataccaatcgggttctg
aactggagtgggattccttttgctattggggtatatggcttttgcttctctgggcactca
gtcttcccaaacatctaccaatctatggctgacaaatcaaaattcaatgacgcagtagct
atatgctttattctgtgtattctaatatatggaggtgttgcaataatggggtatctcatg
tttggtcaaagcacattgtctcagattactttaaatatgcctgaggattcaatcgcttca
agaatagcagtatggaccactgttatcaacccattcacgaaatatgcattgctgatgaat
cctttgggaagaagcatagaggaattgctgcctccaagaatctctagtagtttcttgtgt
tttattctcctaaggacagtgcttgtcttttctaccctgtgcgttgcatttctaattccc
ttttttggtcttgtgatggctctgattggttctcttctcagtatactggtgatttggaga
tcatcaaacttagcttattcaaatctgattatgttcctctccctccaaatcagtgcaaca
atcatggcaaacacacagctagtaataacatttgttcctcttctgctcttgactttcttg
catgcccattccaactctgttttccaatctccaatgctcctattatatcccagccatgaa
catagtctggaccatatttgctttgtgatggtgcactcaaagaacaagtggctaaaggat
tccaggctatgtcaacaaaatgcacaggctgcaggaatttggataccaatcttcaacagt
ctttccactatagctagtctatgttgtgctgcaagccatatggtgaatctatatcttgga
tgtatatttgtgtgcaacatcaaacttttccattcagctctggggtatactggtatcagt
ttcaagtacatctacttaatctggaactttgtattagtgcacattgtctgtagtctgtta
tga
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