KEGG T05026: 104240472

Nicotiana sylvestris (wood tobacco): 104240472

Entry

104240472         CDS       T05026

Name

(RefSeq) U2 small nuclear ribonucleoprotein B''-like

K11094

U2 small nuclear ribonucleoprotein B''

Organism

nsy Nicotiana sylvestris (wood tobacco)

Pathway

nsy03040

Spliceosome

Brite

KEGG Orthology (KO) [BR:nsy00001]
09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104240472
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nsy03041]
    104240472
Spliceosome [BR:nsy03041]
Complex A
  U2 snRNP components
   U2 snRNP specific factors
    104240472
Complex B
    104240472
Complex C
   U2 SnRNP specific factors
    104240472

SSDB

Motif

Pfam:

RRM_1 RRM_5 RRM_SRRT RRM_ACIN1 DUF4523 xRRM RRM_PARP14_3 DUF6445 RRM_YTH1 TP_0593_N

Other DBs

NCBI-GeneID:

104240472

NCBI-ProteinID:

XP_070016284

UniProt:

A0ACM5ZFE0

LinkDB

Position

10:complement(128837110..128842299)

AA seq 232 aa
MMLTGDIPPNQTIYIKNLNEKVKKEELKRSLYCLFSQYGRIADIVALKTPKLRGQAWVVF
SEVTAASNAVRQMQNFPFYDKPMRLQYAKTKSDCIAKAEGTYDKKKKQEEKVEKRKRTEE
TPQTGAANDPRADSNGGPAAASRQGRPSAQETVAEPNNILFIQNLPHETTSMMLEVLFKQ
YPGFREVRMIEAKPGIAFVEFDDDVQSSVAMQALQGFKITPQNPMAITYAKK

NT seq 699 nt +upstreamnt +downstreamnt
atgatgcttacaggagacataccaccgaatcaaactatttacattaagaacttaaatgag
aaagtcaagaaagaagagctaaagaggtctctttattgcttgttctctcagtatgggagg
attgcggatatagtggcgctgaagacccccaaacttagaggacaagcatgggttgtgttt
agtgaagtaactgctgccagtaatgctgtgcggcaaatgcaaaacttccctttttatgac
aaacctatgcggttacaatatgctaaaacaaagtcagattgtattgctaaggcagagggg
acctatgacaagaaaaagaaacaagaggaaaaagtggaaaaaaggaaacgtactgaagaa
actccgcaaactggtgcagctaatgaccctagagctgacagtaatggaggcccagctgct
gcttctcgccaaggaaggccaagtgcacaagaaacagttgcagaaccaaataatattctc
tttatacagaatctgccccatgagactacaagtatgatgcttgaagtgctcttcaaacaa
tatccaggttttagggaagttcgaatgattgaagcgaagccaggtattgcatttgtggaa
tttgacgatgatgtccagtcttcggtcgccatgcaggcccttcaaggcttcaaaatcacc
ccccaaaatcccatggctatcacctatgccaagaaatga

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