Nicotiana sylvestris (wood tobacco): 104240654
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Entry
104240654 CDS
T05026
Name
(RefSeq) uncharacterized protein isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104240654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104240654
03012 Translation factors [BR:
nsy03012
]
104240654
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
104240654
Translation factors [BR:
nsy03012
]
Eukaryotic type
Release factors
104240654
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
EF-G_D2
THDPS_M
Motif
Other DBs
NCBI-GeneID:
104240654
NCBI-ProteinID:
XP_009793820
UniProt:
A0A1U7Y4U8
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Position
3:206674341..206686221
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AA seq
520 aa
AA seq
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MDIEEDIKALQLESSAEDSVMTNAEEVKPDEALKPEKIDGADDSVMSDECKPDDVEKTDN
MEDGLKEEANANLKPTHVDDEIEVERNRHLNVVFIGHVDAGKSTCGGQILFLSGQVDDRT
IQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETETTRFTILDAPGHKSY
VPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLLIVVNKMDDP
TVNWAKERYDEIESKMIPFLKSSGYNVKKDVQFLPISGLLGSNMKNRVEKSVCSWWNGPC
LFEALDAVEVPPRDPKGPLRIPIIDKFKDMGTVIMGKIESGSIREGDNLLVMPNKAAVKV
LAIFCDEDRVRDAGPGENVRVRLSGIEEEDIMSGFVLCSAAQPIPAVTEFVAQLQILELL
DNAIFTAGYKAVLHIHAVVEECEIVELIQQIDLKTKKPMKKKPLFVKNGAIILCRVQVNN
LICIEKFSDFPQLGRFTLRTEGKTVAVGKVTALPTVADNA
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggatattgaagaagacatcaaggcattgcagcttgaatcatctgcagaagatagtgtg
atgactaatgctgaagaggtgaaacccgatgaagccctaaaacctgaaaaaattgatgga
gcagacgatagtgtgatgtcagatgaatgcaagccagatgatgttgaaaaaactgataat
atggaagatggcctgaaagaggaagcaaatgcaaacttaaagccaacacacgttgatgat
gagattgaagtcgagagaaacagacatctgaatgttgtattcattggtcatgttgatgct
ggaaagtccacatgtggaggacaaatactattccttagtggtcaagttgacgatcggact
atccagaagtatgagaaggaagcaaaagataagagtagagagagttggtatatggcctat
atcatggatacaaatgaagaggagcgagtcaagggaaaaacagttgaagttggaagggca
cactttgaaacagagacaacaagatttacaattttggatgccccgggtcacaagagttat
gtcccgaacatgatcagtggggcatctcaagccgatataggtgtattggttatatcggct
agaaagggtgaatttgaaactggatatgaaagaggtggacaaacacgtgaacatgttcag
cttgcaaagacactaggagtttctaagctccttattgttgtaaataagatggatgatcct
actgtcaactgggctaaagaaaggtatgacgagattgagtcgaaaatgataccattcttg
aaatcatctggatacaatgtgaagaaagatgttcagttcctcccaatctctggtctcctt
gggtcaaatatgaaaaatcgggtggagaaaagtgtatgctcatggtggaatggtccatgc
ctttttgaagctcttgatgcggtagaagtccctccccgagatcctaaaggtccactaaga
atacctattatcgacaaatttaaagatatgggaactgttattatgggtaaaatagaatcc
gggagcatacgtgaaggtgataatttgttggtgatgccgaataaggccgctgtgaaagtc
cttgccatattctgtgatgaagacagagttagggatgcaggtcctggggaaaatgtacga
gttaggttgtccggaatcgaggaagaggacattatgtcgggttttgtcttgtgcagtgct
gcacagcctatacctgcagttactgagtttgttgcacagttacagatcctcgagctgttg
gacaatgctatttttactgctggctacaaggctgtgttgcatattcatgctgttgttgaa
gaatgtgagattgttgaactgattcagcagattgatctcaagacaaagaaacccatgaag
aagaaacctttgtttgtgaaaaatggtgccatcatcttatgtcgtgttcaggtgaataat
ctgatttgtattgaaaagttctctgattttccacaacttggacgattcactcttcgcacg
gaagggaaaactgttgctgtggggaaagttactgccctccctactgttgctgataatgct
taa
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