Nicotiana sylvestris (wood tobacco): 104240870
Help
Entry
104240870 CDS
T05026
Name
(RefSeq) coatomer subunit beta'-1
KO
K17302
coatomer subunit beta'
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nsy04131
]
104240870
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nsy04147
]
104240870
Membrane trafficking [BR:
nsy04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
104240870
Exosome [BR:
nsy04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
104240870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_IFT140_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_WDR19_1st
PEP5_VPS11_N
Beta-prop_IFT122_1st
WD40_like
Beta-prop_WDR75_2nd
Beta-prop_Nup120_160
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
TPR_GEMI5
WD_LRWD1
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
104240870
NCBI-ProteinID:
XP_009794070
UniProt:
A0A1U7XWS9
LinkDB
All DBs
Position
6:complement(205823991..205837425)
Genome browser
AA seq
912 aa
AA seq
DB search
MPLRLEIKRKLAQRSERVKAVDLHPTEPWILASLYSGTLCIWNYQTQTMAQSFEVTELPV
RSAKFIARKQWIVAGADDMFIRVFNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPD
LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKGSRRVVIGYDEGTIMVKLG
REVPVVSMDNSGKVIWAKHNEIQTVNIKSVGADYEVTEGERLPLAVKELGTCDLYPQSLK
HNPNGRFVVACGDGEYIIYTALAWRNRSFGQALEFVWSSDGEYAVRESTSRIKIFSKNFQ
EKKSIRPTFSAEHIYGGTLLAMCSNDFICFYDWTECRLIRRIDVNVKNLYWADSGDLVAI
ASDSSFYILKYNRDVVSAHLDSGRSVDDQGVEEAFELLYEINERVRTGIWVGDCFIYNNS
SSRLNYCVGGEVTTMFHLDRPMYLLGYLANQSRVFLVDKEFNVVGYTLLLSLIEYKTLVM
RGDWDRANEVLPSIPKEHHNSVARFLESRGMMEEALEVATDPDYRFELAIQLGKLEIAKE
IAVIAQSESKWKQLGDLAMSAGMLEMAEECLKHANDLSGLLLLYSSLGDAEGITKLASFA
KEHGKNNVAFLCLFLLGKVDQCVQLLVDSNRIPEAAFMARSYLPSKVSEIVAIWKKDLNK
VNQKAAEALADPEEYPNLFEHWQIAHAVEARVAEERGVYPPAADYGNFADRPATNLVEAF
SNMRMDEEPLENGDMEHEVVEQNGDEVHEHEQDDIQQESQEEAVVVDADSTDGAVLVNGN
EADEEWVLTPRH
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgcctctaaggttggagattaagaggaaacttgctcaaagatcagaaagggtaaaggcc
gtggatctacatcctacggagccatggatactggcaagtttatattcggggactctttgc
atttggaactaccagactcagacaatggcacaatctttcgaagtcactgaattaccagtt
agatcagcgaaatttatagcacgcaagcagtggattgttgctggtgccgacgacatgttt
attcgtgtattcaattataataccatggataaggtcaaagtatttgaggcgcacacagat
tatattaggtgtgtggctgttcaccctactctaccatatgtgctgtcatcatctgacgac
atgcttataaagctttgggactgggagaagggatggttatgcactcaaatttttgagggt
cattcccattatgtgatgcaagtcacatttaatcctaaagacaccaatacttttgctagt
gcatctcttgatcggactataaagatttggaaccttggctctcctgatcctaacttcacg
ctggatgcccatttgaaaggggttaattgtgttgactatttcactggtggtgataaacca
tatctaattactggttccgatgatcatactgctaaggtctgggactatcagacgaaaagt
tgcgtccagactcttgaaggtcacacacacaacgtctctgctgtatgttttcatccagat
cttcctattataatcacggggtcagaagatggtactgttcgtatatggcatgcaactact
tacagacttgagaacacgttgaattatggccttgaaagagtttgggctattggttatatg
aaaggttcaagaagggttgtaattggctatgatgagggaaccattatggtaaaacttggt
cgagaggtacctgttgttagcatggataatagtggaaaagtcatttgggctaagcacaat
gagattcaaactgttaacatcaagagtgtgggggcagattacgaggttactgagggagaa
cgattgcctttggctgtcaaggaattgggaacttgtgacctatacccacaaagcttaaag
cataatccaaacggaaggtttgtcgttgcttgtggagacggagagtacatcatatatact
gctcttgcctggagaaataggtcatttggccaagccctggaatttgtttggtcttctgat
ggagaatatgctgtgagagaaagtacttcaaggattaagattttcagcaaaaatttccag
gagaagaagagcatccggcccactttctctgctgagcacatctatgggggtactttattg
gcaatgtgctcaaatgatttcatttgtttctacgattggactgagtgcaggttgatacga
cgaattgatgttaatgtcaaaaacctctattgggctgacagtggtgatctggtggctatt
gcaagtgattcttcattttacatacttaaatacaatcgcgatgttgtttctgcacattta
gatagtggaagatctgtagatgaccaaggtgttgaagaagcttttgaacttctttatgag
ataaatgaacgggtcagaactggaatttgggttggagattgtttcatttacaataattct
tcttcgaggctgaactactgtgtaggcggtgaggttaccacaatgtttcacttagaccga
cctatgtacttgctgggatatcttgctaatcaaagtagggttttcctggttgacaaagag
ttcaatgttgtgggatatactttactgctcagcttgatcgagtacaagacacttgtgatg
cgtggtgactgggacagagcaaatgaggtcttgccatcaattcctaaggagcatcataat
agtgttgctcgtttcttggaatcacggggaatgatggaggaagcattggaagttgcaact
gaccctgactacagatttgaacttgccatacagttgggtaaattagagatagcgaaggaa
attgctgtaatagcacagagtgaatccaaatggaagcagttgggtgatctagcaatgtct
gctggaatgctggagatggcagaggaatgtttgaagcatgcaaatgacttgagtggttta
ctgctgctttattcctcattaggagatgctgaaggaataactaaactagcatcttttgcc
aaagagcatgggaaaaacaatgttgcatttctttgcctgttcctcttgggtaaagtggat
cagtgcgttcagctgttggttgacagcaatcggatacctgaggctgcatttatggcaaga
tcttatcttccaagtaaggtgtctgaaatagttgctatttggaagaaggacctcaataag
gttaaccagaaagcagcagaagctttggctgatcctgaagaatatcccaacctgtttgag
cactggcaaattgcacatgctgttgaagctagagtcgccgaggaaaggggtgtgtaccca
ccagcagcagattatggaaattttgctgatagaccagctaccaaccttgtagaagctttc
agcaacatgagaatggatgaagaaccccttgaaaatggagatatggagcatgaggttgtg
gaacagaatggtgatgaggtgcacgaacatgagcaagatgacattcaacaagagagccaa
gaagaggctgttgtggttgatgctgactctactgatggtgcagtactcgtcaatggaaac
gaggctgacgaagagtgggtgcttacaccacgtcactag
DBGET
integrated database retrieval system
