Nicotiana sylvestris (wood tobacco): 104240945
Help
Entry
104240945 CDS
T05026
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nsy04131
]
104240945
04121 Ubiquitin system [BR:
nsy04121
]
104240945
Enzymes [BR:
nsy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104240945
Membrane trafficking [BR:
nsy04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
104240945
Ubiquitin system [BR:
nsy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104240945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
DUF1272
zf-ANAPC11
zf-Nse
zf-RING_16
HypA
Motif
Other DBs
NCBI-GeneID:
104240945
NCBI-ProteinID:
XP_009794149
UniProt:
A0A1U7XWZ3
LinkDB
All DBs
Position
9:complement(5582965..5585583)
Genome browser
AA seq
316 aa
AA seq
DB search
MSSGSYTHWCHRCRQPIRPRGASCLCPNCGGGFVEELDDMLGARSTIEDDPHFGLMDPFP
DPRFGIMDALAQFMRQRMAGRNPNFDIRTRSGIVPGQGRGFGSGPWLIFHGQTPVSMTEN
DAFEYFFNGSPGMGQRRPNLDDLMGPGLQQLIEQLSINDRQGPPPAPRSAIDALPTVKIT
QRHLNTDSQCPVCQDNFELGSEARQMPCKHIYHADCIVPWLVRHNSCPVCRLELPSRPSG
SAPTNWSSRTGNVSSGSNSSSRDNASQNQGRRNPFSFLWPFRSSNQNTGNYVERGGSSST
APYEENNEANYPTWRF
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtgggagctacacacactggtgccacagatgcaggcaaccaattcggcctcga
ggggctagctgtctttgcccaaattgtggtggaggtttcgttgaagagcttgatgacatg
ctaggtgctagatctactattgaggatgatcctcattttggattaatggatcctttcccg
gacccaagatttggtataatggacgcccttgctcaattcatgaggcagagaatggcagga
agaaacccgaactttgacattaggacaagatccggcattgttcctggacaaggaaggggt
ttcggttctggtccatggttgatatttcacggccaaactcctgttagtatgacggaaaat
gatgcatttgagtacttcttcaatggaagtccgggaatggggcagcggcgacctaattta
gatgatttaatggggcctgggctgcaacagttgattgagcagctcagtattaatgatagg
cagggtccacccccggcacctcgttccgcaatagatgctttgcctactgtcaagatcaca
cagaggcacctcaacacggattctcagtgcccggtttgtcaagataactttgaattgggt
tctgaagcaaggcagatgccatgtaagcatatttaccatgcagattgtattgtaccttgg
ttggttcggcacaactcgtgccctgtttgccgccttgagctgccttcgcgaccttctgga
agtgccccgaccaattggagttcaagaactggaaacgttagcagtggcagcaacagtagt
agccgggacaatgccagtcagaaccagggtaggaggaatccgttctcgtttctgtggcct
tttcgctcgtccaaccaaaacacaggcaattatgttgagagaggaggaagcagctcgaca
gctccctacgaggagaacaatgaagcgaattaccccacttggcgtttttag
DBGET
integrated database retrieval system
