Nicotiana sylvestris (wood tobacco): 104241113
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Entry
104241113 CDS
T05026
Name
(RefSeq) elongator complex protein 1 isoform X1
KO
K11373
elongator complex protein 1
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nsy03016
]
104241113
Transfer RNA biogenesis [BR:
nsy03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
104241113
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
A-sol_ELP1
TPR_ELP1
HB_ELP1
tRNA_Me_trans_M
VMAP-M8
Motif
Other DBs
NCBI-GeneID:
104241113
NCBI-ProteinID:
XP_009794330
UniProt:
A0A1U7Y6B1
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All DBs
Position
5:24688260..24699380
Genome browser
AA seq
1316 aa
AA seq
DB search
MKNLKILKEQLSKIQLNSEDEAISFAAFDVERNRLFLASSSNFIYSLLLPSPHQNAGAWN
SISDNLIDLEPGDFITSMDYLMEKEAVIIGTSYGLLLLYTADDNTTEIVGRVEGGVKCVS
PSPDGDLLGVITGFRQILMMTPDWDVLYEMALDDLPEDIDVHEHTYSSNYSSESSVSWRG
DGKYFATLSRVNNSHLSHKKLKIWERDSGALHSVSESKPFMGSTLDWMPSGAKIAAVYDR
KEDRKCPSIVFFERNGLERSSFCLNVEVDATVEFVKWNCNSDLLAAVVRGEKYDSLRIWF
LSNNHWYLKQEIRYMKDDRVRFMWDPIKPQELISWTVGGHITTYNFVWITAVMNNSVALV
IDDSKILITPLSLSLIPPPMYLFCLNFPSAIQSMTFCSKSSMNHLAASLSDGRLCVVELP
AIDCWEELEGKEFDVEAASFDSGYKSFIHLAWLDSHKLLGVSHSQISNSAIKDSSKDELS
IYCLHEIELVCSEDRISSSVTCSGWHAKVLNRLSLEGTVIGIVPDQGNGCSAYVQFDGGK
VFEYALKVADARGLHQKRDDMSFSSSCPWMDLVQIGGCLPQKALLFGLDDSGRLLAGERT
LCNNCSSFSFYSNSADHTVTHLILATKQDLLFIIDISDILKGELEVKYGNFLAVFKHKKG
EDERNYIQIWERGAKIVGVLHGDESAIILQTVRGNLECIYPRKLVLASIINALIQGRYKD
ALLMVRRHRIDFNVIIDHCGWQNFVQSAAEFVKQVSNLSYITEFVCSIKNENIMETLYKN
YRSLPHDNEAKAVEHGDLESSHGNSKIHSVLLAIRKALEEHVAESPARELCILTTLARSD
PPALEKALERIKIIREKELSGSDDLRRELYPSAEEALKHLLWLSDSEAVFETALGLYDLN
LAAIVALNSQKDPKEFLPYLQELENMPIVLMQYNIDLRLQRFETALQHIVSAGGAYFEDC
MILMKKNPHLFPLGLQLVTDSVKKNQVLEAWGDHLSSRKCFEDAATTYLCCSCLDKALKA
YRECGNWGGVLTVAGLIKLGKEEVLQLAHELCEELQALGKPGDAAKIALDYCADVNAGTS
FLVSAREWEEALRTAFLHRRDDLVEEVRTASLECASSLVGEYEEGLEKVGKYLTRYLAVR
QRRLLLAAKLQSDERSINEVDDDTASETSSNFSGMSAYTLGTRKGSAASIKSSASTKARD
MRRQRNRGKIRAGSPGEEIALVEHLKGMSLTAGAKRELKSLLICLVMLGKEDIARKLQHV
ATNFQLSQMAAVKLADETMSNDRINEHFYVLENYIPKIKEEMQHSELFSWQSKVLI
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatttgaagatattgaaggagcaattgtcgaagattcagttaaattccgaggat
gaagctatcagcttcgcagcatttgacgtggagcgaaatcgcctcttcttagcttcttct
tctaacttcatatacagtttacttctgccttctcctcatcagaatgcaggagcttggaat
tccatatcagataaccttattgacttagagcctggggatttcattacttccatggattat
ctaatggaaaaagaagcagtgattattgggacttcatatggtcttctattgctatatact
gcggatgataatacgacagaaattgttggccgagtggagggtggagtaaagtgtgtatca
cctagtccagatggagatcttcttggtgtaattaccggttttcgacaaattctcatgatg
acaccagactgggatgttttatatgagatggcactggatgatctgcctgaagatattgac
gtacatgaacatacttactcttccaattattcgtcggagagctcagtttcgtggagaggt
gatggcaaatactttgcaacgttaagcagggtgaataattctcatctctcccataaaaag
cttaaaatctgggaacgggactcaggggcactccattctgtttcagaatcaaagcctttc
atggggtcaactttggattggatgcccagtggagccaaaattgctgcagtttatgaccga
aaggaagatagaaaatgcccatctatagttttctttgagaggaatggattagaaagaagc
tcattttgcctcaacgtagaagttgatgctactgtagaatttgtgaagtggaattgtaac
tcagaccttctagctgctgtggtcagaggtgaaaagtacgactctctgaggatctggttc
ttaagtaacaatcactggtacttaaagcaagaaatcagatacatgaaggatgatagagtc
agattcatgtgggatccgataaagcctcaagagttaatttcttggactgttggtgggcat
atcacaacctacaacttcgtctggattacagctgtcatgaataactcagtggcacttgta
attgatgactccaagatactaataacccctctttctttatctctcatcccaccacctatg
tacctcttttgtttgaattttccctctgccattcagagtatgacattttgctctaaaagt
tctatgaatcacctggctgcatcattgtcagatggcagattatgtgttgtagagcttcct
gctattgattgttgggaggagctagaaggtaaagaatttgatgttgaggctgcttctttt
gattcaggatataaatctttcattcacctagcatggttggattcgcataagcttcttggt
gttagccatagtcaaattagcaactcagcaataaaagactcctctaaggatgagctttct
atatattgcctccatgaaattgagcttgtatgttctgaagatcgtatttctagttcagtg
acatgctctggttggcatgctaaagttttgaatagattatctcttgaaggtacagtaatt
ggtatagttcctgaccagggaaatggctgctcagcgtatgttcagtttgacggtgggaaa
gtgtttgagtatgctttgaaggtggctgatgccagagggcttcatcagaaacgtgatgat
atgagtttttcttcatcttgcccctggatggatcttgtgcaaattggaggctgtttgccg
cagaaagctttgctttttggtctcgatgacagtggtagattgctcgctggtgaaaggaca
ttgtgcaacaattgcagcagtttttctttctactcgaattctgccgaccacactgtcacc
catttgattcttgcaactaagcaggatttactgtttattattgatattagtgatatcctg
aaaggagaactggaggtcaagtatgggaacttcctggcagttttcaagcacaaaaaagga
gaagatgaaagaaactatattcaaatatgggaaagaggtgccaaaattgtaggtgttctt
catggggacgaatctgctatcatacttcaaacagttcgagggaatcttgagtgcatctac
cccagaaaattggtcctcgcttcaataattaatgctttgatccaggggcgttacaaagat
gcattgctcatggtaagaaggcacagaattgatttcaatgttataattgaccactgtggt
tggcaaaactttgttcagtcagctgctgagtttgtcaagcaggtgagcaatctaagttat
ataactgaatttgtctgttcaataaagaatgaaaatatcatggagacactgtacaaaaat
tatagatccctacctcacgacaatgaagctaaagctgtagaacatggagacctcgagagt
tctcatggtaatagcaagatccattctgtcctactggccataaggaaggctctggaggag
catgtagcggaaagtcctgctagagaactctgcattctgaccactttagctcgaagtgac
cctccagctcttgaaaaagctttagagagaataaaaattatccgagaaaaggaattatcg
ggttcagatgacctgagaagggaactctacccttctgctgaggaagctttaaaacatctt
ttgtggttgtccgactcagaggcagtttttgaaactgcgttaggactttatgatttgaac
cttgcagctatcgttgccttgaattcgcagaaggatcctaaagaatttcttccctatcta
caagaactagaaaacatgccaatagtgttgatgcaatacaatatagaccttagattgcag
aggttcgagactgcacttcaacacattgtttctgcaggaggtgcttactttgaggattgt
atgatcctcatgaagaaaaatccccatcttttccccttgggactccaattagttaccgac
tctgtcaagaaaaaccaagtacttgaagcctggggagatcatcttagttccagaaaatgc
tttgaggatgctgctactacttatttgtgttgttcttgtttggataaagctttgaaggct
tatcgtgagtgtggtaattggggtggggttctgacagtagctggtctcattaaacttggg
aaggaggaagtgttgcaactagcacatgagctttgtgaggaactccaagcactaggtaaa
ccaggggatgctgcaaaaatagctttggattattgcgcagatgttaatgccggtactagt
ttcttggtcagtgcaagggaatgggaagaagctctgaggactgcatttcttcacaggaga
gatgacttggtcgaggaagtaaggactgcatcacttgagtgtgccagctcattggttggt
gaatatgaggaagggttggagaaagtggggaagtacttgactcgctatttggcagttcga
caacggagattattacttgctgccaagctacagtcagatgagcgatcaataaatgaagtt
gatgatgatactgcttctgaaactagtagcaatttcagtggaatgagtgcatacaccttg
gggacaagaaagggatcagctgcatctatcaaatccagtgctagtacaaaagcgagagac
atgagacgtcaacgaaatagagggaaaatacgtgctggcagtcctggtgaggagattgct
ttggtagagcatttaaaggggatgtctctgactgctggagctaagcgcgagcttaaatct
ctcttgatatgccttgtgatgctggggaaggaagatattgctaggaagttgcaacatgtt
gctacaaattttcaactgtcccaaatggctgctgtaaaattagctgacgagaccatgtca
aatgatagaatcaatgagcatttctatgttctggagaattacatccccaaaataaaggaa
gaaatgcagcattcagagcttttctcctggcagtcaaaagtattgatttga
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