Nicotiana sylvestris (wood tobacco): 104241137
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Entry
104241137 CDS
T05026
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104241137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nsy04121
]
104241137
Enzymes [BR:
nsy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
104241137
Ubiquitin system [BR:
nsy04121
]
Ubiquitin ligases (E3)
HECT type E3
104241137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
PDS5
mTOR_dom
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-GeneID:
104241137
NCBI-ProteinID:
XP_009794383
UniProt:
A0A1U7XTV5
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All DBs
Position
7:158630532..158640633
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AA seq
1539 aa
AA seq
DB search
MGNRGQKRTETVDELPADKRACSSTEFRPSTSNSVVHTTMSSIHESRNGDVDTSSSSSGS
SEGGKDSAYGSCESDNSFRDYYRRQSLDNQGKFKGILSSLSKELSNESALLAALTELCEL
LSFSPDSSISNLMADSFSPILVRLARHESNPDIMLLAIRAMTYLCEIHPRSSAYLVRHDA
VPALCQRLMAIEYLDVAEQCLQALEKISHDQPIVCLQSGAIMAILSYIDFFSTSVQRKAL
STVVNICKKLPSECPSPLMEAVPILCNLLLYEDRQLVESVATCLIRIVEQVCRSSDMLDE
LCKHGLVHQATHLIELNGRTTVCQSVYVGLIGLLVKLAAGSIVAVRTLFELNISRISKDI
LSTYDFSHGGPSTLTVDGHYNQVDEVLKLLNELLPPISREQNIQLAADKEHFLINHPDLL
QKFGFDLFPVLIQVVNSGVNLYACYGCLSVINKLVYFSKSDMLEFLQNTNISSFLAGVFT
LKDPHVLILALQIVDKLLEKLSHVFLNSFVKEGVLFAVDALLSPEKCSQFLFSDETCQGS
VPCAAIKCLCFASESPTGPEARTCKIEKETVQNLARHIRTNYFATDSMNPELGITDVLQK
LKTLSSALTDLVHKASSSIAPLQEKEDFYPVLHQIMSELNGNGAVSTFEFIESGVVKSLV
NYLSNGQYLGQKVDGDGSVDQLYIVEKRFVLFGRLLLYNSVCPPEDSAFLALIKRLHSAL
SSVENFPVILSHASKLRNSYATVPYGRCTSYPCLKVHFVKGDGESSLGDYTEGVVNVDPF
SPLETIEGYLWPKVSKRKSEKLKPPTLAIEEESSSRSSQGASTSQGKSPGPMELDTTSTN
AHETQEVKGNLQLSVEVETMDIEKTKSDSMDISNINAESLEKGKLCSSEDDSSTSLECTG
CSDDEDVAPKLIFYLEGQQLNQKLTLYQTVLQQQIKAGNDIITNSSMWSHVHRVIYRRFV
RHKPGCAQSGKHVVDSTPSEKPITWWQYTPFFSSMFGSEMVDLEKSSPTYDILFLLKSLE
GLNRFSFHLMSRRKIYAFAEGKTTDFGDIKVTNSDLPQNEFANTKLTEKLELQMRNPFSV
SVGGMPPWCGQLVNSCPFLFGFEARCKYFRLAAFGQPPIQPEPSSHNTAGGMSGRHQNNS
GLRRKKILVHRNRILDSATQMMDLHADQKVVIEVEYTDEVGTGLGPTLEFFTLVSHEFQK
IGLGMWRGDRMASGTVSVEEESGMLFSSFGLFPRPWSPLSRSSSGLEFSEVLKKFVLLGQ
IVAKALQDGRVLDLPLSKAFYKLVLGRELTVYDIQSFDPELGGALLEFQALIERKRHLES
EGKPSLDLELNFRNTKIDDLCLDYTLPGYPDYVFNSASDAKMVDMSNLEEYVSLIVDASL
NSGISRQIGAFKSGFDQVFPIKHLQIFTEDELERLLCGECGFWNSNELLDHIKFDHGYTA
SSPPVVNLLEIMREFDSKQQRAFLQFVTGAPRLPPGGLASLSPKLTIVRKTCSGWVDADL
PSVMTCANYLKLPPYSSKEKMKEKLLYAITEGQGSFYLS
NT seq
4620 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaccgggggcagaaaagaactgaaactgttgatgaactgcctgccgataagcga
gcctgtagctccacagaattcaggccaagtacctctaattcagtggttcatactacaatg
agttctatacacgaaagccgcaatggcgatgtggacacatcatcgtcaagttcagggtca
agtgaaggtggaaaggactctgcttatggatcttgtgaatctgataatagcttcagggac
tattacaggcggcaatcgctggacaatcagggcaaattcaaaggaattttgtcaagtttg
agcaaggaattatctaacgaatcagcgctgttggctgctcttaccgagctatgtgaattg
ttatctttttctcctgatagttcgatctcaaacttaatggcagattcattttctcccatt
cttgtaagattggctagacatgagagcaatcctgatataatgctattagctatcagggca
atgacttatttgtgtgaaattcatcctcgttcttcggcctacctagttagacatgacgca
gttcctgccctttgtcaaaggttaatggccattgagtacttggatgtggccgaacagtgt
ttgcaagcactggagaaaatttcccatgaccagccgattgtgtgtttgcaatctggggct
atcatggctattttaagttatattgatttcttttctacaagtgtgcagagaaaggcactc
tcaactgtagtaaatatttgtaaaaagcttccctctgaatgtccgtcacctttgatggag
gcggttcccattttgtgtaatcttcttctatacgaggatagacagcttgttgagagtgta
gccacttgcttaattagaatagtggagcaagtatgtcgctcttccgatatgttggatgaa
ctctgtaaacacggtctggttcatcaagccacacatctcatagaattgaatggtcgaaca
acagtttgccaatcagtttatgttggtttaattgggttacttgtcaaactggctgctgga
tctattgtggctgtcaggactctctttgaacttaacatcagccgcatatcaaaggacatt
ttatccacttatgacttctcacatggggggccttctactctgacggttgatgggcattat
aatcaggtagacgaagttctcaagttgttaaacgaacttcttcctcccatatccagagag
cagaatatccaactagctgcagacaaagaacacttcctcatcaatcaccctgatcttctg
cagaaatttggctttgatttatttcctgtgttaatccaggtggtcaattctggtgtaaat
ttatatgcttgttacggctgtctatctgttatcaataagttagtttatttcagcaaatct
gacatgctcgaatttcttcaaaatactaatatttcaagcttcttagctggagtttttact
ctcaaagatcctcatgttctgatactagcccttcagattgttgataagcttctagagaag
ctctctcatgttttcttgaactcatttgtgaaggaaggtgttctctttgctgttgatgca
cttctttcaccggaaaaatgttcgcagtttctattttcagatgaaacctgccaaggatca
gtaccatgtgctgcaataaaatgtctttgttttgcttctgagtctccaacaggacccgaa
gcaaggacctgcaagatagagaaagaaactgttcaaaatcttgctaggcatatcaggacc
aattactttgcaacagactcaatgaatcctgaattaggaataaccgatgttctacagaag
ctgaagactctatcttctgcgttaactgatctggtccataaagctagtagcagcattgct
cctcttcaagagaaagaagacttttaccctgttttgcatcaaattatgtcagagttaaac
ggaaatggtgccgtttccacgtttgagttcattgaaagtggagttgtaaagtctctcgtg
aattacctttccaatggccaatacttgggacaaaaggtagatggtgatggttcagtagat
cagctgtatattgtagaaaagagatttgtgctgtttggtagattacttttgtataactca
gtctgtcctccggaagactccgcctttcttgcactgataaagagattgcacagtgcactt
tcctctgtggaaaacttcccagtcatcttgagtcatgcgtctaagctacgaaactcgtat
gctactgtcccatatgggcgttgtacttcatatccttgtctgaaggtccactttgtgaag
ggagatggggagtcgtcacttggagattatacagagggtgttgtgaatgtagatcctttt
tcgcctttggaaacaattgagggatacttgtggccaaaagtgagtaaaaggaaaagtgag
aagttgaaacctcccactctggctatagaggaagagtcatcgtctcgttcatcacaaggt
gcaagcacgtctcaaggcaaaagtccaggacccatggaattggacaccacatccaccaat
gcccatgaaacacaggaggtgaagggtaacttacaactatctgttgaagtggaaactatg
gatatagaaaaaacaaagagtgattcaatggatatttcaaatattaatgcagagtctttg
gagaaaggaaaactttgttcgtctgaagatgatagtagcacaagtttagagtgtactgga
tgttctgatgatgaagatgttgcaccaaaattgatattctacttggagggacagcagttg
aaccagaagttgaccctatatcaaactgtactccagcagcagattaaagcagggaatgac
atcattactaattcaagcatgtggagtcacgtacacagggtgatctacagaagatttgtg
agacataaaccaggatgtgctcagagtggcaaacacgtcgtagattctactccatctgag
aaacctataacatggtggcagtacaccccatttttctctagcatgtttggctctgaaatg
gttgatcttgagaaatcaagtccaacttatgacatcttatttcttctgaaaagcttggaa
ggcctgaacaggttcagttttcatctcatgtctcgtaggaaaatatacgcttttgcagaa
gggaagaccaccgattttggtgatataaaggtcacaaattctgatctccctcagaatgaa
tttgcaaacactaaattgacagagaaactagaactgcaaatgaggaatcctttttctgtt
tccgtaggtggcatgccaccttggtgtggacagttggttaattcatgcccctttttgttt
ggtttcgaggcaagatgcaagtatttccgcctggctgcatttggtcagccaccaatccaa
cctgaaccgtcatctcataatacggcagggggtatgagcggtaggcatcaaaacaatagt
ggccttcgccggaaaaaaatcttagttcatcgaaatagaattttggattctgcaacacag
atgatggacctccatgccgatcagaaggttgtcattgaggtggaatatactgatgaggtc
ggtactggtcttggaccaaccttggaattttttaccttggtcagtcatgagttccagaag
attgggctagggatgtggagaggtgatcgcatggctagtggaaccgtgagtgtagaggag
gaatctggaatgctcttctcttcttttggtctcttccctcgcccatggtcccctttatcc
cgttcgtcaagtggcctagagttctctgaagtgctgaaaaagtttgtgcttctggggcag
atagttgcaaaggctctccaagatggcagggttttggatcttcctttatccaaagcattt
tacaaacttgttcttgggagggaactcacggtatatgacatccagtcatttgaccccgaa
cttggtggggctctcctagaatttcaggctcttattgaaagaaaaagacatctggaatct
gagggaaaaccatcattagaccttgaacttaatttccggaatacgaaaattgatgatctt
tgccttgactatactcttcctggatatccagattatgtctttaattctgcatccgatgca
aaaatggttgacatgtctaatttagaggaatatgtttcactcattgtggatgcttcttta
aattctgggatatcaagacaaattggagcattcaagtcaggctttgatcaggtgttcccc
atcaaacatcttcaaatattcacagaggatgaattagagcgactgttgtgcggagagtgt
ggattttggaactccaatgagcttctggatcacatcaagtttgaccacgggtacactgct
agcagtcctccagttgtaaatttactcgaaattatgagggagtttgacagcaaacaacag
agagcattcctgcagtttgtgactggtgcacctagactgcccccagggggtctggcatct
ctaagcccaaagttaacaattgttcggaagacttgcagtggttgggttgatgctgacctg
cctagtgtgatgacatgtgccaattatctgaagctaccaccttactcttcaaaagagaaa
atgaaggaaaaactgttatatgccataactgaaggacaaggctcattctacctttcatag
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integrated database retrieval system
