Nicotiana sylvestris (wood tobacco): 104241789
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Entry
104241789 CDS
T05026
Name
(RefSeq) LEC14B homolog
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nsy04121
]
104241789
Ubiquitin system [BR:
nsy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104241789
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Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
WDR54
Beta-prop_DCAF4
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
104241789
NCBI-ProteinID:
XP_009795043
UniProt:
A0A1U7XZH3
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Position
1:54518166..54525030
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AA seq
474 aa
AA seq
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MSRSRRLLDACESARGDGILNIDQRVDEGTSCLDHEIAQLTKIRSDPHGRMRQLLPGKRK
APFSPVNMLAAREGNYSGRGRFSSADCCHLLSRYLPTNGPSVVDQMRSCAYVSQFSADGS
LFVAGFQESHIRIYNVDRGWKIQKDIGARSLRWTITDTSLSPDQRFLVYSSISPIVHIVD
VGSGMKQSVANVTEIHEGLEFSSPTDDYDDYSFGIFSVKFSTDGRELVAGSSDNSIYVYD
LEARRPSLQIPAHKSDVNAVCFADETGHLIYSGSDDSLCKVWDRRCFGTRGQAAGVLIGH
LEGITYIDTRGDGRYLISNGKDQAIKLWDIRKMPSNINYSPRPRSYDWDYRWMDYPEHVR
NKRNPRDLSLATYKGHKVLRTLIRCYFSPAHSTGQKFIYTGSADSSVYIYDVVSGAQVAK
LDYHQEPVRDCNWHPYYPMLVSSGWDGIIANWEFPGNGASSLPVKPRARRWRRS
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggtctaggaggttattggatgcttgtgaaagtgcaaggggagatgggatacta
aatattgatcaaagagttgatgagggaacaagttgtcttgatcatgaaattgcacaactc
acaaagattaggtcagacccacacgggcgaatgcgacagctgcttcctggcaagagaaaa
gcaccattttcacctgttaatatgttggctgccagggaagggaattatagtggtagagga
agattttcatcagcagactgttgtcatcttttgagccggtatcttccaacaaatggtcct
tctgtagttgatcaaatgaggagctgtgcttatgtttcacagttttcagcggatggttct
ctttttgtcgcgggatttcaggaaagtcatattaggatatataatgtagatcgaggctgg
aaaatccaaaaggatattggagcaagaagtttacgatggacaatcaccgatacgtcgctt
tcaccagaccagcgttttcttgtttattccagtatttcacccattgtccatattgttgat
gttggatctggtatgaaacagtctgttgcaaatgttacggaaattcatgaaggcttagaa
ttttcttcccctaccgatgattatgacgattattcatttggaatattctctgtgaaattt
tctactgatgggcgagaacttgttgctggcagcagcgacaattcaatatatgtttatgat
cttgaagcaagaaggccaagtcttcaaattccagctcataagtctgatgttaatgctgta
tgttttgctgatgaaactggacacctcatatattctggaagcgatgatagcttgtgtaag
gtttgggacaggcgttgctttggaactagagggcaagcagctggagttctcattggacat
ctagaaggcattacatatattgacacgcgtggagatggccggtatcttatctcaaatggg
aaagatcaggctatcaaactctgggatataaggaaaatgccttctaacattaattactcc
ccaaggcctagaagttatgactgggattacagatggatggattacccggaacatgttaga
aacaagagaaacccacgtgacctgtcattggctacttataaaggccacaaagtcttgcgc
actcttatacgctgttatttctctcctgcacatagcactgggcaaaagttcatctacact
ggatcagccgattcatctgtttatatttatgatgtggtgagtggagctcaggttgctaaa
cttgattaccatcaggaaccagtgagagattgcaattggcacccttactaccccatgctc
gttagctctgggtgggacggtatcattgctaactgggaatttcctggtaatggtgcaagc
tcattgccagtgaagccgcgggccagacggtggaggcgatcttaa
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