KEGG   Nicotiana sylvestris (wood tobacco): 104242250
Entry
104242250         CDS       T05026                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104242250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nsy03019]
    104242250
   03041 Spliceosome [BR:nsy03041]
    104242250
Messenger RNA biogenesis [BR:nsy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     104242250
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     104242250
Spliceosome [BR:nsy03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    104242250
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 104242250
NCBI-ProteinID: XP_070007749
UniProt: A0A1U7Y8K3
LinkDB
Position
7:60662831..60663496
AA seq 221 aa
MALKEPYKRINGKTTITKVANSGARDREDESLSTVYVANVPHDMLPGRLLEYFSSYGVVE
KGPFGFDKETGKSRGYAIFVYRTLEGAKTAIYEPIKWVDGHHLTCEMALGRTKKKPRVSL
NSGSFNLNCHYQNPRSMFGGGGSRPEVSQVGVQYAQFQGNRDIYPQNCDCGLVSNCNIQV
QGLSPTVIGRNHIGSGLCSKLSHGDYSLWSSEFSRHNPVWF
NT seq 666 nt   +upstreamnt  +downstreamnt
atggcactcaaagagccatataagaggattaatggaaagacgacaatcacaaaggttgct
aattcaggagccagagacagagaggatgagtctttaagtacagtttatgtggctaatgta
ccacatgacatgttaccaggtagattgttggaatatttttcctcttatggtgtagtagaa
aagggtccttttggtttcgataaagaaacaggaaaatcaagaggttacgctatttttgtg
tacagaacactagaaggggctaaaacagcaatttatgaacctatcaagtgggtcgacgga
caccatttaacgtgtgaaatggccctcgggaggacaaagaaaaaaccccgcgttagtctt
aactcggggtcattcaatttaaattgccattaccagaacccaagatcaatgtttggtggt
ggtggctcgagaccagaagtgtcacaagttggagttcagtatgcccagtttcaaggcaac
agggacatatatccacagaattgtgattgtggcctagtttctaattgtaacattcaggtt
cagggcttatcaccaacagttataggtcgcaaccacattggctctgggctttgttctaag
ttgtctcatggcgattacagtctttggtcctcagaattttctaggcataatccagtatgg
ttttga

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