Nicotiana sylvestris (wood tobacco): 104242550
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Entry
104242550 CDS
T05026
Name
(RefSeq) uncharacterized protein isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104242550
Enzymes [BR:
nsy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
104242550
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
104242550
NCBI-ProteinID:
XP_009795926
UniProt:
A0A1U7Y1U3
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Position
4:140217409..140224493
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AA seq
669 aa
AA seq
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MGYRRRFKHMIKCLCACAVQTGACCHSGGPGTMSPIGVKLYIQDRHVMMDNGIVQVTLSN
PDGIVTGIHYNGIDNLLEVLNDESNRGYWDVVWNSLDGGRSGVFEVIKGTNFKVITETDD
QVEISFSRPWDPSLQGKLVPLNIDKRFILLRGCSGFYSYAIYEHVGSPEWPAFSLGETRI
AFKLRKDKFHYMAVADNRQRFMPLPDDRLPARCQRLAYAEAVLLNNPVEPELRGEVDDKY
QYSCDNKDNKVHGWISMDPPVGFWQITPSDEFRSGGPVKQNLTSHVGPTTLAMFLSSHYA
GDDLTPKFAQGEAWKKVFGPIFIYVNSVMQGEDPVALWDDANIQMQVEVLSWPYCFPASE
DFPSADQRGNVSGRLLVQDKYINDDYIAANGAYVGLAPPGEAGSWQKECKDYQFWATADN
DGYFSINNIRPGDYNLYAWVPGFIGDYLYETPISISPGRNVDVDEIVYQPPRDGPTLWEI
GIPDRTAAEFFVPEPNPRFINKLFVNHPDRFRQYGLWERYSELYPKDDLVYVTGESDYSK
DWFFAQVPRRKEDGTYQGTTWQIRFKLDSVNQGGTYKLRIAIASATLAEVQVRVNDPNTN
RPLFSTGLIGRDNSIARHGIHGLYWLYNIDIQGNLLVQGDNTIYLGQPRNQSPFQGIMYD
YIRLEAPPN
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgggttatcggcgtcgtttcaaacacatgataaaatgcttatgcgcgtgcgctgtacaa
acaggagcttgttgtcatagcggaggtcctggaacaatgtccccaattggagtgaagttg
tacattcaggatcgccatgtgatgatggataatggcatagtccaagtcacgttatcaaat
ccggacggaattgtcaccggaatacactataatggcattgataatctacttgaagtcctt
aatgatgaatccaaccgaggatactgggacgtcgtctggaattctctagatggtggaaga
agtggagtatttgaagtgatcaagggtacaaatttcaaggttataacagagacagacgat
caggttgagatatcattttcccgaccatgggatccctccctccaaggcaaacttgttccg
ctgaatattgacaaaaggtttattttgctccgtggctgctctggtttctactcctatgcc
atttatgagcatgttggttcacctgagtggcctgccttcagccttggtgaaactagaata
gcattcaagctccggaaagataagtttcattacatggctgtggcagacaataggcaaaga
ttcatgcctctaccagatgaccgattgcctgcaagatgccaacgccttgcttatgcagaa
gcggtcctacttaataatcccgtggagcctgagctaagaggagaggtcgatgacaaatac
cagtactcatgcgataataaagacaacaaggtccatggctggatatctatggatccacct
gtggggttctggcaaattactccgagtgatgaatttcgatctggtggacctgtcaaacag
aacctcacatcccatgtcggtccaactaccctagctatgtttctaagctctcattacgct
ggggacgatctaacaccaaaatttgctcaaggggaagcatggaagaaagtttttggcccc
atttttatatatgttaattctgttatgcaaggggaagatcctgttgctctatgggatgat
gccaacatacagatgcaggttgaagttctaagctggccttactgttttccagcatcagaa
gattttccatcagcagaccaacggggcaatgttagtggaagacttttggttcaagacaag
tacattaatgatgattatatagcagcaaatggcgcttatgttgggcttgctccaccagga
gaagctggttcctggcaaaaagaatgcaaggactaccaattttgggctacagcagacaac
gatggatacttctccataaacaatatacgtccgggggactacaatctttatgcatgggtc
cctggattcattggggactatttatatgagactcccatttccatatctccaggtcgtaat
gttgatgtggacgaaatcgtatatcagcctccaagggatggccccacattatgggaaata
ggcattcctgatcgtactgctgcagaattttttgttcctgaacccaacccaagatttatc
aacaagcttttcgtcaatcatcctgataggtttaggcaatatggattgtgggaaagatac
tccgagctatatccaaaggatgaccttgtgtatgtaactggagaaagtgactatagtaaa
gactggttttttgctcaggttccaaggagaaaagaggatggcacatatcaaggaacgacg
tggcaaatcagatttaaacttgattcggtcaatcaaggaggaacttataaattgcgcatt
gcaattgcatctgcaactttagctgaagtgcaggttcgggtgaatgatccgaacacaaac
cggcctctattttcaaccggattgattggaagagataactcaattgctaggcatggaatt
catggcctatattggttgtacaatatagacatacagggaaatctgctagtgcagggagat
aacactatttacttgggccaaccaagaaaccaaagtcctttccaggggattatgtatgac
tatattcgtcttgaagctccaccaaactaa
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