KEGG   Nicotiana sylvestris (wood tobacco): 104242612
Entry
104242612         CDS       T05026                                 
Name
(RefSeq) UBP1-associated protein 2A-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104242612
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nsy03019]
    104242612
   03041 Spliceosome [BR:nsy03041]
    104242612
Messenger RNA biogenesis [BR:nsy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     104242612
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     104242612
Spliceosome [BR:nsy03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    104242612
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Nup35_RRM_2 RRM_PARP14_3 RRM_3 Cut8 Nucleoporin_FG2
Other DBs
NCBI-GeneID: 104242612
NCBI-ProteinID: XP_009795994
UniProt: A0A1U7Y9S7
LinkDB
Position
4:complement(10998549..11001338)
AA seq 401 aa
MAKNNAKKRKIIKKADSINATPSKIDKKQNNNKKQQKIPKSNNPTRPDSDSDSDQPAPVK
LQNLLEPYSKDQLLTLAVDTAIAHPSFYNLINSAADNDITHRKIFIYGLARETTRQTLIS
VFEQFGEVEECNVVMDHNTGKAKGYAFVVFKSRKSADKALKKPQMTINGRVATCKLAAVK
DTAVNGTMEFGNRKIYVSNVPRDVAPEKLRLFFENFGEIEAGPMGFDPTTGKSKGYALFL
YKTVEEAKRCLEEPCKVFDGRKLYCKKAAEPKIGGGEASITTEVIQHPLLAMPPSVAAAQ
NMGMMGQDPNLAMMNQLYGRMVVNPYVGFLNPFVGVYGGMLGSLGGGASGLGVYGGGVGG
SSIGGSSGGVAPGLMQAYPNKQVGQPSPAKLPGTSGYSSHL
NT seq 1206 nt   +upstreamnt  +downstreamnt
atggctaaaaacaatgcaaaaaagcgaaagatcatcaaaaaagcagattccatcaatgct
acaccctcaaaaatcgacaaaaaacagaacaacaacaagaagcagcaaaagatacccaag
tccaataacccaacccgacccgattctgattcggactccgaccagccggcacccgtaaaa
ctccagaatcttctcgaaccttactctaaagatcaactccttaccttagccgtagacacc
gctatagctcacccttccttttacaaccttatcaattcagctgccgacaatgacatcact
caccggaaaatcttcatctacggcttagcgcgtgagaccacgcgccaaaccctaatttcc
gtttttgaacagttcggagaagttgaggaatgcaacgtcgtgatggaccataataccggc
aaggcaaaagggtacgcttttgtggtcttcaagtctcgaaaatcggctgataaagcatta
aaaaaacctcaaatgacaatcaacgggcgagtggctacgtgtaagttggctgccgtgaag
gacactgccgttaatgggaccatggagtttggtaataggaagatttacgtgagtaatgtg
cctcgtgacgtggctccggagaaattaaggttgttttttgaaaacttcggggaaattgag
gctggaccaatggggtttgatccaacaactgggaaatcaaaagggtatgctttgtttctt
tataaaactgttgaggaggcgaagagatgtttagaagagccgtgtaaggtgtttgatgga
cggaagttgtactgcaagaaggctgctgagccaaaaattggcggcggagaggccagtatt
acgactgaggttatacagcacccgctgctggcaatgccgccatcagttgcagctgctcag
aatatggggatgatgggtcaggacccgaatctagcgatgatgaatcaattgtatggtaga
atggttgtgaatccttatgtaggatttttgaatccgtttgtaggagtttatggtgggatg
ttgggtagtttaggagggggtgcttcaggtttaggggtatatggtggtggtgttggtggt
agcagcattggtggttctagcgggggagtggcccccgggttaatgcaggcctacccaaat
aagcaggttggccaaccttcacctgctaagctaccggggactagtggctactcatcgcac
ttgtga

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