Nicotiana sylvestris (wood tobacco): 104242681
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Entry
104242681 CDS
T05026
Name
(RefSeq) serine/arginine-rich splicing factor SR34A-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104242681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nsy03041
]
104242681
Spliceosome [BR:
nsy03041
]
Common components
Common spliceosomal components
SR proteins
104242681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_3
DUF2457
QWRF
Motif
Other DBs
NCBI-GeneID:
104242681
NCBI-ProteinID:
XP_009796057
UniProt:
A0A1U7XVN4
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All DBs
Position
3:complement(150226059..150231764)
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AA seq
277 aa
AA seq
DB search
MSGRFSRTIYVGNLPADIKESEVEDLFYKYGRILDIELKIPPRPPCFSFVEFESSRDAED
AIRGRDGYNFDGCRLRVELAHGGRGPSSSSDRRGSYGSSGGGGRYGVSRHSDYRVIVRGL
PSSASWQDLKDHMRKAGEVCFAEVSRDSEGTFGMVDYTTYEDMKYAIRKLDDTEFRNPWT
RTYIRVKEYKRSPSRSRSRSRSPKRSRSRSRSRSPKRSRSKSPGRSLSRSPTPKSRSASP
VKPTRSRSMSRSRSRSISRSLSRSRSASPRQARSNSG
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgagtggccgtttttcacgcacgatttatgttggcaaccttccagctgatataaaggaa
tcggaagttgaagatctattttataagtatggtcgtatattggatattgagttgaagatt
ccacctcgccctccttgcttttcttttgtggagtttgaaagttctcgagatgcagaagat
gccatcaggggtagagatggttacaactttgatggctgtcgcctgagggttgagcttgct
catggaggaagagggccatcatcttcaagtgatcgccgaggcagctatggcagcagtggt
ggtggagggcgttatggtgtttctcggcattctgattaccgagttattgttcgaggtctt
ccatcttctgcttcttggcaagatttgaaggatcatatgcggaaagctggtgaagtgtgc
tttgctgaagtttctcgtgacagtgaaggtacctttggcatggttgactacacaacttat
gaagacatgaagtatgctataaggaaacttgatgatactgagttcaggaatccttggaca
agaacctacatccgggtgaaagaatacaagcgaagtccttcaagaagtcgcagtaggagc
agaagtccaaagaggagcaggagcaggagcagaagcagaagtccaaagaggagtaggagc
aaatcacccggccgatcactttcgagatcaccaacgccgaagtctagatctgcgtctcct
gttaagccaaccaggtccagatcaatgtcaaggtcgaggtctaggtctatatcgaggtca
ctgtcaaggtccagatcggcatcaccacggcaggcacgatcaaacagtggctga
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