Nicotiana sylvestris (wood tobacco): 104242891
Help
Entry
104242891 CDS
T05026
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104242891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104242891
03110 Chaperones and folding catalysts [BR:
nsy03110
]
104242891
03029 Mitochondrial biogenesis [BR:
nsy03029
]
104242891
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nsy04147
]
104242891
Enzymes [BR:
nsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
104242891
Messenger RNA biogenesis [BR:
nsy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
104242891
Chaperones and folding catalysts [BR:
nsy03110
]
Heat shock proteins
HSP60 / Chaperonin
104242891
Mitochondrial biogenesis [BR:
nsy03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
104242891
Exosome [BR:
nsy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104242891
Exosomal proteins of other body fluids (saliva and urine)
104242891
Exosomal proteins of breast cancer cells
104242891
Exosomal proteins of colorectal cancer cells
104242891
Exosomal proteins of bladder cancer cells
104242891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Flavoprotein
Mrr_cat
Motif
Other DBs
NCBI-GeneID:
104242891
NCBI-ProteinID:
XP_009796310
UniProt:
A0A1U7YBY9
LinkDB
All DBs
Position
3:complement(191059402..191066350)
Genome browser
AA seq
570 aa
AA seq
DB search
MFRAVASSIRSSTSRKLVASRINSRRNYVAKDINFGIQARLAMLQGVNELAEAVKVTMGP
KGRNVIIEKSQGNPKVTKDGVTVAKSISFKEKTKNVGADLVKQVANATNSVAGDGTTCAT
VLTQAIFTEGCKAVAAGVSVMDLRSGINMAVDAVVADLKSRAVMISTPEEITQVATISAN
GEREIGELIARAMEKVGKEGVITVADGNTLDNELEVVEGMKLGRGYISPYFVTDAKTQRC
ELENPVILIHDKKISDLNSLVRILELAVKRRRPLLIVAEDVESDALSMLILNKHRAGVKV
CAIKAPGFGDNKRANLEDLAVLTGGEVISEERGLDLNKVQFDMLGTAKKVTVSLDDTLVL
HGGGDKKLIEERCEQLRIAKEKSSAMFDKEKAQERLSKLSGGVAVFKVGGASEAEVGERK
DRVTDALNATRAAVEEGIVPGGGVALLYATKCLKDLQTANDGQKKGVEIIENALKAPTFT
IASNAGVDGALVLGKLLEQDDLNLGFDAAKGTYRHMVKAGIIDPLKVVRTALVDAASVSL
LLTTTEAAIVDRQGEKNPLANRMPNMGDMY
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgttcagagctgttgcttcatcaatcaggtcctcaacttccagaaaattggttgccagt
aggattaattcgagaagaaattatgttgcaaaggatatcaattttggtatccaggcacgg
ttagccatgttacaaggggttaatgagcttgcagaagcagtaaaagtcactatgggacca
aagggtcgtaacgtgatcattgagaaaagccaagggaatcctaaggtcacaaaggatggt
gtcactgtagccaagagcatcagctttaaggaaaagacaaagaatgtgggtgctgatctt
gtgaagcaggttgctaatgctactaattcagttgctggagatggtaccacctgtgcaact
gtgcttactcaggcaattttcacagaaggttgcaaagctgttgctgcaggtgtaagtgtg
atggatttgcgtagtggtattaacatggccgttgatgctgttgttgctgacttgaagagc
agagcagtcatgattagcaccccggaggagattacacaggtggctactatctctgcaaat
ggtgaacgtgaaattggggaactaatagctcgagcgatggaaaaagttgggaaggaaggg
gtgattactgttgctgacggaaataccttagataatgagttggaagtggtggaaggcatg
aagcttggtcgtggttacatatctccttattttgtcacggatgcaaagactcaaagatgt
gaattggaaaatccagtgatccttattcatgacaagaaaatctcagacttgaactcgctt
gtgcggatattggagcttgctgttaagagaaggaggcctctgttaattgttgctgaagat
gtagaaagtgatgcattatctatgcttatcctaaacaagcatcgtgctggggttaaggtc
tgtgccattaaagctcctggttttggggataataaaagagccaacttggaggatcttgca
gttcttactggaggagaggtcattagtgaagaacgtggtctggatctgaacaaagttcaa
tttgatatgcttggtactgccaaaaaggttaccgtttcccttgatgacaccttagttctg
catggaggtggggacaagaagctaattgaagaaaggtgtgagcagctaaggatagccaag
gaaaagagtagtgccatgtttgataaggagaaagctcaggagcgtttgtcaaagctatct
ggtggtgttgctgtttttaaggttggaggggccagtgaagcagaagttggggaaaggaaa
gatagggtgacagatgccttaaatgcaacaagggctgctgtggaagagggcattgttcca
ggtggtggtgttgctctcctatatgcaaccaaatgtcttaaagaccttcagactgcaaat
gatggccaaaagaagggagttgagatcattgagaatgctctcaaggcacctacttttaca
atagcttcaaatgctggtgtagatggcgccttagttctaggcaagctcttagaacaagat
gatctgaatctaggatttgatgcagctaaaggtacatatagacacatggtcaaggctgga
attattgatcccctgaaagtagttagaacagcattagtggatgctgccagcgtgtctttg
ctattgacaacaactgaggctgccattgtggaccgtcaaggagagaaaaacccacttgca
aaccgcatgccaaacatgggtgatatgtattga
DBGET
integrated database retrieval system
