Nicotiana sylvestris (wood tobacco): 104242925
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Entry
104242925 CDS
T05026
Name
(RefSeq) nuclear pore complex protein NUP93A isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104242925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104242925
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104242925
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
PrmA
Motif
Other DBs
NCBI-GeneID:
104242925
NCBI-ProteinID:
XP_009796341
UniProt:
A0A1U7Y305
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Position
4:1873882..1895639
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AA seq
863 aa
AA seq
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MANDVDMSGWSELLHSSSKLLEQAAPSAQFPPLQRNLDQLEALTKKLKAKNLRTEAPSQS
IAATRLLAREGINAEQLARDLKSFELKQTTFEDVFPAEATTVEEYLQQIHEMAMVSAVQE
AQKDNLKNFNDYMMKVLENDWKKEKRDFLHSLSRISTLPRTNISESSPLSGRQGQIASLT
YSPQISSGPASVESAPLANRPIVEKKAAAYGEVVKNLNSARERSFPFKPATAFKHALESL
GLNAYGGKSVGIQKIWHLMSALMGEDSAAQHNISKKMSLVIGARRHLEWGHEKYVMETIQ
AHPAQAALGGAVGNLQRIRAFLRIRLRDYGVLDFDAVDARRQPPVDTTWQQIYFCLRTGY
YNEAGEIAQLSRMSHQFAPLLTEWISSGGMVSAETAAVASEECEKMLRLGDRAGRPMYDK
KKLLLYTIISGSRRQIDRFVREFPTLFSTIEDFLWFKLSAVRESPVRSSVVLNEGLAPYT
LDDLQAYLNKFEPSHYTKNGKDPLVYPYVLLLSIQLLPAVLYLSKDIGDEGYNVDAAHMA
IVLADYGVLSEGTGLGQKFGAMDAFAEASSIIRQYGSFYLRHGDLVMALEYYVQAAAAVG
GGQLSWSGRGNMDQQRQRSSMLKQLLTELLSRDGGIDILLGPRGTGEEGQLGRFLTDEKT
RQQFLLDAARQYQDAGLYDKSIEIQKRVGAFSAALDTINKCLSDAICALARGRLDGDSRT
SGLILSGNEILEMFKYYPDISPQERENVLAQQIVLRQLEAVLSIHKLARLGNHLDAIKEV
AKLPFLPLDPRTPDFATDVFKNLSHHVQACVPDLLKVALHCLENVRDTDGSLRALRDKIA
NFLANNMNQNWPRDLYEKVARSL
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgatgtagacatgagtgggtggagtgagcttctacactcttcttcgaagctt
ctagaacaagccgctccgtctgctcagttccctcctcttcagaggaatttggatcaactc
gaagcattaacgaagaaattgaaggccaaaaatctaagaaccgaagctccttctcaatct
attgctgctaccaggctactagctcgtgagggcatcaacgcagagcagcttgctcgtgat
cttaagtcttttgagttgaagcagacaacatttgaagatgttttccctgcggaggcaaca
actgttgaagagtatctgcaacagatccatgaaatggcaatggtctctgcggttcaagaa
gctcagaaggataacctaaaaaatttcaatgattacatgatgaaagttttggagaacgac
tggaagaaagaaaaaagggacttcctccacagcctaagccgaatttcaaccttacctagg
accaatatcagtgaatcaagccctttaagcggtcgtcaggggcaaatagcatctttgaca
tatagccctcagatttcttctggtccagctagtgtggagtctgcaccattagctaatagg
cccatcgttgagaaaaaggctgccgcatatggagaagttgtcaagaatctcaatagtgca
agagagcgtagttttcccttcaaacctgctacagcttttaagcatgctcttgaaagtttg
ggtctcaatgcatatggtgggaagtcagttggcattcagaagatctggcatctaatgtcg
gcattgatgggtgaagattcagctgcccaacataatatttcaaagaaaatgtccttagta
attggagctagacgccacctagaatggggtcacgagaagtatgtcatggaaacaattcaa
gctcatcctgctcaggccgcacttggtggtgctgttggtaatttgcagagaatccgcgcc
tttctcaggatccgtctaagggactatggggtccttgattttgatgcggttgatgcccgt
agacagcctcctgttgataccacctggcagcagatatacttttgcttgagaactggctac
tacaatgaagcaggagagattgcccaactatctcgcatgtcccaccagtttgctcctctg
ctgacagagtggatttccagtggaggcatggtatcagcagagacagcggcagttgcttcg
gaagaatgtgagaagatgttaaggttgggtgatcgagcaggtcgaccaatgtacgataag
aaaaagttgcttctctacaccataatatctggttcccgtaggcaaattgacagatttgtt
cgagaattccctacacttttctctactatagaggatttcttgtggttcaaattatctgct
gtacgtgaaagtcctgtcaggtcttctgttgtcctgaatgaggggttggcaccttacact
ttggatgatttgcaagcttacctaaacaagtttgagccatcacactatactaaaaatgga
aaggatcctttggtttatccttatgttttacttttaagcatccagctacttccagccgtc
ctttatttgtccaaggatatcggagatgaaggatataatgtagatgctgctcatatggct
atagtgttggcagactatggagtcctctctgaaggtacagggttagggcaaaaatttggg
gccatggatgcttttgctgaagcttctagcataattaggcagtatggatcattttacctg
cgtcatggtgatctggtaatggcattggaatactatgtgcaagcagcagcagcagttggt
ggtgggcagttgtcatggagtggacgtggtaatatggatcagcaaaggcaaaggagctca
atgttgaagcaacttcttacagagcttttgtcgcgagatggtggtatcgatattttactt
ggtccaaggggtactggagaagaaggtcaacttggaaggtttttaacagatgaaaagaca
agacaacagtttctgcttgacgctgctcggcagtatcaggatgcggggctttatgacaag
tccatagagattcaaaagagagtgggggcattttcagctgcattggatacgataaacaag
tgcctttctgatgcaatatgtgccttggcacgtggaaggttggatggggatagccggaca
tctgggctcattctttcaggaaatgagatcctggagatgttcaaatattaccctgacatc
agtccccaagagagagagaatgtgttggcgcaacaaattgttctaagacagctggaggct
gtgctgtctattcataagcttgcaagacttgggaatcacttggatgctataaaggaagtg
gctaagctcccattccttcctttggatccaaggacgccagatttcgccacagatgtcttt
aaaaatttgtctcaccatgtccaagcttgtgtaccagacctcctaaaagttgcgcttcat
tgcctggagaatgttagagatactgatgggtcacttcgtgcgttaagggacaagattgca
aacttcctcgcaaacaatatgaatcagaattggcctcgtgatctgtatgaaaaggttgct
cgtagtttgtga
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