KEGG   Nicotiana sylvestris (wood tobacco): 104242950
Entry
104242950         CDS       T05026                                 
Name
(RefSeq) autophagy-related protein 18b
  KO
K17908  autophagy-related protein 18
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    104242950
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:nsy04131]
    104242950
   03029 Mitochondrial biogenesis [BR:nsy03029]
    104242950
Membrane trafficking [BR:nsy04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    104242950
Mitochondrial biogenesis [BR:nsy03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    104242950
SSDB
Motif
Pfam: PROPPIN WD40_WDHD1_1st Beta-prop_EML_2 WD40_Prp19 WD40_CDC20-Fz Beta-prop_Vps41 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st BCAS3_WD40 WD40_MABP1-WDR62_1st
Other DBs
NCBI-GeneID: 104242950
NCBI-ProteinID: XP_009796366
UniProt: A0A1U7Y330
LinkDB
Position
11:complement(4396082..4403283)
AA seq 366 aa
MANQSSSYPILCASFNQDNSCFAIGTREGFKIFDCNTGRLLYERAAGAFIIVEMLFSSSL
LAIVGAGEQPSLSPRRLCMFNTMTGVALEELNFLTSILAVRMNKKRLIVILQEKTFIYDI
NSLKILDTIDTVPNPKGLCAFSPSLDGSYLALPASTTKGSLLVYNVSDLRLHCEIDAHRA
PLSVLTLSSGGTHIATASEQGTMIRVHLVSDATKSYSFRRGTYTSNIFSLSFAPAAELPD
ILLATSSSGSVHVFSLSSPPNQRSSGLLASIIPIPHTVSDALDPAQHCILHRAVPAGVRS
NTVIRKIEKFDETATPEHVVLRATISMITYGGYFLEYVYNVNHQNKSSWTLEREFNLLTA
ETSSLS
NT seq 1101 nt   +upstreamnt  +downstreamnt
atggcaaatcaatcctcttcttatccaattctctgtgcttccttcaatcaagacaacagt
tgttttgcaattggaacaagggaaggcttcaaaatctttgattgtaatactggaagactc
ctttatgaaagagctgctggagcattcattatagtagaaatgttgtttagctcaagcctt
ctcgcaatcgttggggctggtgaacagccatctttgtcgcctcgaagactatgtatgttt
aatactatgactggagtagctcttgaggaactaaacttcttaacttctatccttgctgtt
cgtatgaataagaaaagattgattgtcatattgcaggagaagacatttatttatgatata
aacagtcttaagatattagacactattgatacggtgccgaatccaaaaggactttgtgca
ttttcacccagcttggacggttcatatttggctcttccagcaagtacaaccaaaggatct
ttgttagtctataatgtttccgacctccgtttacactgtgagatagatgctcatcgagcg
ccattgtctgtcttgacactttcatcaggcgggactcacattgcaacggcgtctgaacaa
gggaccatgatcagagttcatcttgtttcagacgcgactaagtcatatagcttcaggaga
gggacgtacacttcaaatatcttttctttgtcgttcgcgccagcagcagaacttccagat
attcttcttgcaactagttcttctggttctgttcatgttttctctttgagttcaccccca
aatcaaaggtcttctggtcttttagcatcaataataccaatacctcatactgttagcgac
gccctggatcctgctcaacattgcatactgcatcgtgctgttccagctggagtgagaagt
aatacagtgatccgcaaaatagagaaatttgacgagacagcaacacctgaacatgtcgta
ctaagagccactatatcaatgatcacatatggcggatacttcctggagtacgtctacaat
gtcaaccatcagaacaagtcttcgtggaccttggaacgggaattcaatcttttaacagca
gaaacgtcctcattatcatga

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