Nicotiana sylvestris (wood tobacco): 104242950
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Entry
104242950 CDS
T05026
Name
(RefSeq) autophagy-related protein 18b
KO
K17908
autophagy-related protein 18
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
104242950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nsy04131
]
104242950
03029 Mitochondrial biogenesis [BR:
nsy03029
]
104242950
Membrane trafficking [BR:
nsy04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
104242950
Mitochondrial biogenesis [BR:
nsy03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
104242950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_Vps41
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
BCAS3_WD40
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
104242950
NCBI-ProteinID:
XP_009796366
UniProt:
A0A1U7Y330
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Position
11:complement(4396082..4403283)
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AA seq
366 aa
AA seq
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MANQSSSYPILCASFNQDNSCFAIGTREGFKIFDCNTGRLLYERAAGAFIIVEMLFSSSL
LAIVGAGEQPSLSPRRLCMFNTMTGVALEELNFLTSILAVRMNKKRLIVILQEKTFIYDI
NSLKILDTIDTVPNPKGLCAFSPSLDGSYLALPASTTKGSLLVYNVSDLRLHCEIDAHRA
PLSVLTLSSGGTHIATASEQGTMIRVHLVSDATKSYSFRRGTYTSNIFSLSFAPAAELPD
ILLATSSSGSVHVFSLSSPPNQRSSGLLASIIPIPHTVSDALDPAQHCILHRAVPAGVRS
NTVIRKIEKFDETATPEHVVLRATISMITYGGYFLEYVYNVNHQNKSSWTLEREFNLLTA
ETSSLS
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcaatcctcttcttatccaattctctgtgcttccttcaatcaagacaacagt
tgttttgcaattggaacaagggaaggcttcaaaatctttgattgtaatactggaagactc
ctttatgaaagagctgctggagcattcattatagtagaaatgttgtttagctcaagcctt
ctcgcaatcgttggggctggtgaacagccatctttgtcgcctcgaagactatgtatgttt
aatactatgactggagtagctcttgaggaactaaacttcttaacttctatccttgctgtt
cgtatgaataagaaaagattgattgtcatattgcaggagaagacatttatttatgatata
aacagtcttaagatattagacactattgatacggtgccgaatccaaaaggactttgtgca
ttttcacccagcttggacggttcatatttggctcttccagcaagtacaaccaaaggatct
ttgttagtctataatgtttccgacctccgtttacactgtgagatagatgctcatcgagcg
ccattgtctgtcttgacactttcatcaggcgggactcacattgcaacggcgtctgaacaa
gggaccatgatcagagttcatcttgtttcagacgcgactaagtcatatagcttcaggaga
gggacgtacacttcaaatatcttttctttgtcgttcgcgccagcagcagaacttccagat
attcttcttgcaactagttcttctggttctgttcatgttttctctttgagttcaccccca
aatcaaaggtcttctggtcttttagcatcaataataccaatacctcatactgttagcgac
gccctggatcctgctcaacattgcatactgcatcgtgctgttccagctggagtgagaagt
aatacagtgatccgcaaaatagagaaatttgacgagacagcaacacctgaacatgtcgta
ctaagagccactatatcaatgatcacatatggcggatacttcctggagtacgtctacaat
gtcaaccatcagaacaagtcttcgtggaccttggaacgggaattcaatcttttaacagca
gaaacgtcctcattatcatga
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integrated database retrieval system