Nicotiana sylvestris (wood tobacco): 104243058
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Entry
104243058 CDS
T05026
Name
(RefSeq) polygalacturonase At1g48100
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy00040
Pentose and glucuronate interconversions
nsy01100
Metabolic pathways
Module
nsy_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104243058
Enzymes [BR:
nsy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
104243058
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
3H
NosD
Conotoxin
YxzE
SARAF
Motif
Other DBs
NCBI-GeneID:
104243058
NCBI-ProteinID:
XP_009796485
UniProt:
A0A1U7YCH9
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Position
10:complement(120591579..120596015)
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AA seq
480 aa
AA seq
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MKKNYKHSPLIFLLVLLLIFFTAFSMVSVEARKHHTKKSKIHHKHRNRNNKQKNGGGNKA
PDCSDSPSPAPSHGFYPTQFPIFDILSFGAKGDGVSDDSKALEGAWEAACKVQGATLHIP
SEFQFLINPITLQGPCMPNFIFQVDGTLLAPSKVGTWPKSSLFQWLNFKWMHNFTIQGTG
TFDGQGYNWWKLSQIDYFQEMKTSKSIPDIKPTVLRFYASYNVTVRDIKIMNSPQCHLKF
DNSKGVKINNVTISAPGSSPNTDGIHLQNSQDVEIHHSNIGTGDDCVSIQTGCSNIHVHH
INCGPGHGISLGGLGKDKSVACVSDIIVENVNLESTMYGARIKTWQGGLGSVKNISFSNI
QVSDVKVPIMIDQYYCDKHVCKNQTGAVAISNVKFNQITGTYSAKPIHLACSNSIPCTDV
DLIDIQLKPSFNYRGIQQGLCWNSYGKSQAPLLPSSMDYCVRRGSGFVRRISRSHENVCS
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaattataaacactctcctctcatctttcttctcgttcttttacttattttc
ttcactgcattttcaatggtatcagttgaggctaggaaacaccatacaaagaagagcaaa
atacaccacaaacataggaataggaataataagcagaaaaatggaggtggaaataaagca
ccagattgttcagactctccttctccagctccttctcatggtttttaccctacacagttt
cccatttttgacatcttgtcctttggagccaaaggtgatggagtttctgatgattccaag
gcacttgaaggagcatgggaagctgcttgcaaagtccaaggggctactctacacattcct
tcagaattccaattcttaatcaatcccattacacttcaaggaccatgcatgcctaacttt
atttttcaggtagatggaactctcttggctccttcaaaagtaggaacctggcccaaatcc
agcttgttccaatggttgaatttcaagtggatgcacaattttaccatccaaggaactggc
acttttgatggccaaggctataactggtggaaactttctcaaattgattatttccaggaa
atgaagacatctaaaagcattcctgatataaaaccgacagttttacgattttatgctagc
tataatgtgacagttcgtgatatcaagattatgaatagtcctcaatgtcacctaaaattt
gacaactctaaaggagtaaaaatcaataacgttacaatctctgcaccaggaagtagccca
aacactgatggtattcaccttcaaaattctcaagatgttgagatccatcattccaatata
ggaacaggagatgattgcgtgtcaattcaaactggttgctctaatattcatgtacatcac
ataaattgtggtccaggacatgggataagcctcggaggactaggtaaagataaaagcgtt
gcatgcgtttcagacatcattgttgagaacgtgaacttggaaagcactatgtatggtgca
aggataaagacatggcagggtggtcttggatccgtcaagaacatatcattttcgaacatt
caagtatcagatgttaaggttccaatcatgattgatcaatattactgcgacaagcatgtg
tgcaagaatcaaacaggagctgtagcaatatccaacgttaaattcaatcagataacagga
acttactctgccaaaccaattcatctagcttgcagtaactcaattccatgcactgacgtt
gatctaattgacattcaattaaaaccatcgtttaattatcggggaattcagcagggattg
tgctggaattcttatggaaaatcacaagcaccacttcttccttcaagtatggattattgt
gtaagaaggggaagtggctttgttagaagaatatcaagatcccatgaaaatgtctgctcg
taa
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