Nicotiana sylvestris (wood tobacco): 104243068
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Entry
104243068 CDS
T05026
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104243068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nsy04121
]
104243068
03036 Chromosome and associated proteins [BR:
nsy03036
]
104243068
Ubiquitin system [BR:
nsy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
104243068
Chromosome and associated proteins [BR:
nsy03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
104243068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_IFT122_1st
Beta-prop_RIG_1st
Beta-prop_SCAP
RMC1_N
Ge1_WD40
Beta-prop_SPT8
CFAP43_N
Beta-prop_VPS8
WD40_RFWD3
Beta-prop_IFT80_2nd
Motif
Other DBs
NCBI-GeneID:
104243068
NCBI-ProteinID:
XP_009796495
UniProt:
A0A1U7Y3H0
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Position
3:complement(154291946..154295399)
Genome browser
AA seq
455 aa
AA seq
DB search
MDAGSYSASSNKKQSRCPLQEQLLQRRNSRENLDRFIPNRSAMDFDYAHYMLTEAAKKGK
ENPAVSSPSREAYRKQLAETFNMNRSRILAFKNKPPTPVEAIPNEFAFVQQPKSAKPRRH
IPQTCERTLDAPDIMDDYYLNLLDWGSSNVLSIALGSTVYLWDASDGATSELVTIDEENG
PVTSVKWAPDGRHIAVGLNNSEVQLWDSTANRLLRTLKGGHRSRVGALDWNNHILTTGGM
DGQIINNDVRIRSPIVDTYQGHDQEVCGLKWSASGQQLASGGNDNCLHIWDRSMASSNST
TQWLHRLEDHTAAVKALAWCPFQGNLLASGGGGSDRCIKFWNTHTGACLNSVDTGSQVCS
LIWNKNERELLSSHGFTQNQLTLWKYPSMVKVAELTGHTSRVLFMAQSPDGCTVASAAGD
ETLRFWNVFGTPEVAKPAPKANPEPFAHQRQTMIR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggatcatactcagcctcatcaaataagaaacaatctcgttgccctctacag
gaacaacttcttcaacgtagaaattctcgtgaaaatttggatcggtttattccaaatcga
tcagcgatggatttcgactatgcacattacatgctgacagaggccgcaaagaaaggtaag
gaaaacccagctgtcagctctccctccagagaggcatacaggaagcagcttgcagaaacc
ttcaacatgaacaggtctcgcattctggcgttcaagaacaaaccacccactcctgttgag
gcaattcctaatgagtttgcctttgttcaacaacccaaatctgcaaaaccccgtcgacac
attcctcagacctgtgagaggacattggatgctccagatattatggatgattactatttg
aacttgttagactggggcagcagcaatgttctttctattgctcttggcagcactgtatat
ctgtgggatgcatctgatggtgctacttcagagctggtcactattgatgaggaaaatggc
cctgttacaagtgttaaatgggctcctgatggtcgacatattgctgttggtcttaacaat
tctgaagttcagctttgggattctacagcaaatcgactcctgagaactttgaaaggtggt
caccgatcccgagttggtgctctagattggaacaatcacattttgacaacaggtggaatg
gatggtcagatcataaacaatgatgtgagaataagatcacctattgttgacacttaccaa
ggccatgatcaagaagtctgtggtctaaaatggtcagcttctggccagcaattagctagc
ggcggaaatgataactgtctccacatatgggacagatcaatggcttcttcaaactctaca
acacagtggcttcacaggcttgaagatcatacagctgctgttaaagccttagcttggtgt
ccttttcagggtaacttattagcctcgggtggtggtggaagtgacaggtgtattaagttc
tggaatacacacactggtgcttgcttgaattctgtagatacaggatcgcaggtttgttcc
cttatatggaacaagaacgaacgagagctgctaagttctcatggtttcactcagaatcag
ctcactctttggaaatacccatctatggtaaaggtagctgagcttactggtcacacctca
agagtacttttcatggctcagagtccagatggctgcacagttgcatctgcagctggagat
gaaactcttagattttggaatgtatttgggactcctgaagttgcaaaacctgcaccaaag
gcaaaccctgaaccatttgctcaccaaaggcaaaccatgattcgctga
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