KEGG   Nicotiana sylvestris (wood tobacco): 104243124
Entry
104243124         CDS       T05026                                 
Name
(RefSeq) nuclear-pore anchor
  KO
K09291  nucleoprotein TPR
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    104243124
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nsy03019]
    104243124
Messenger RNA biogenesis [BR:nsy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     104243124
SSDB
Motif
Pfam: Nucleoprot-TPR TPR_MLP1_2 TPR
Other DBs
NCBI-GeneID: 104243124
NCBI-ProteinID: XP_009796577
UniProt: A0A1U7XX72
LinkDB
Position
6:141612234..141620658
AA seq 2045 aa
MPLFMSDEEYERCSNDAVLVSEKADEFIRDLYNQLETVKAQADAASVTAEQSCSFLEQKY
LSLNSEYSELQSQYSELNSSFERRLSELSQVQAEKQQVHLQSIGKDGDVDRLSTEASELR
KTKRQLMELVEQKDLEISEKNSTIKSYLDKILHLTETAAAREARVCDLETEVSRSQASCS
RLLQEKELVERHNAWLNDELTAKVNDLMKLRRVHSELEADMSAKLADAEKKLNECDRCLK
RKEEQVREMELKFTSLEHDLLTSKDVAAAKEEQMSGEIATLNKLVELYKESSEEWSKKAG
ELEGVIKALESHGNQIENDYKERLEKEVSAKKELEEEVACLKNKLVKSEAELKIRGEDTL
KLLPLNYFTRESLPNSVETSDMVEDDHMVVPSLPVGVSGTALAASLLREGWGLAKMYTKY
QEAVDALRHEQLGRKQAQAVLERVLCEIEEKAGVILDERAEHERLEDAYSVLSEKMQHSL
SQQADLERNVLELNADLRSRDRDYAVAQAEIVDLQEQVTVLLKECRDIQLRGGSVGPKND
YSVVSDSVFMFGAESNADNAGRLLSYKDINSLVEQNVQLRGLVRSLSDQIENRELELKEK
YEKELQKHIDEASSKVNAVLERADEQGRMIESLHTAVAMYKRLYEEHRVHSSDTQSQNLA
EVERQEVMLLPDDSHEALGRAQERAFERVKCLEEESSRLRSELISLRSEREKSALEAQFA
RDKLDRYVKDFELQREEHNAVLMRNVEFSQLIVDHQKKLRESYESLNAAEELSRKLKMEV
SVLKNEKDMLINAEKRASDEVCNLSQRVHSLQAHLDTLQSTENVRDEARAAERKRQEEYI
KCIEKEWAEAKKEVQEERDKVRNLMLERESDFKNALRRAEEMGKELASTSRSLAAAESRA
VIAEARSADLEEKLKASQGKMSERADEGGPSSSTELSGDMHSAEEVKTLKEEMQANKNHM
LQYKSIAQANEEALKQLELAYEDLKVEADIVKKSMEEEALSLRKHITDLENECTVKSIEA
ASAIAGKEEAVAATLAEISSLKEDNSAKMSQISNLEAQITALKDDLDKEHQRWRAAQVNY
ERQVILQSETIQELTRTSQALAALQEESSELRKISDILKTENNELKAKWGAEMSALEVSK
TEAEKKYTEANEQNKVLLDRLEGLHIKLAEKDRESLGTSSGSTTAESDDGLMNVVNYLRR
SKDIAETEISLLRQEKLRLQSQLENAQRRADIAEASLNSERENSRAQVLNEEEFKALQLQ
VRELNLLRESNLQLREENKHNFEECQKLREAAQKMKIEVEGLQKLLNERQENVEACRKEI
EMQRLDKEQLERRVNELVERYKSFDLEEYASLKEAAQQMQVNLREKDAELEKIKKTISEQ
QNLVSSLEQDLTRSRTELSQRELRINEVLQAEASLKSEVDKLRRLIAQLKKRAENLSKEK
DNISKEKDDLARENQALSKQLEDAKLGKRTADAADEQALKDKEKEKDTRIQGLEKMAFQL
KEELKQGKLKRLKTQKTISDSYETVTQQRSKLLDELDKHKQALKTLTDEVEKIRQAKNSQ
SEGTSVDQLLSGTHLEDFTAAYFQAVDEFERVARGELGATGATDISAPDASVSGSVVPGP
AATPSPPASLLTSTPVVGKVVLSKMTSETRKTGRRLVRPRITKPEEPSADVEMQDTDVSS
NSGKHITTPQNAENLENATLATQPPIRKRPSAASTSELQEESSATGEPCLDVAQPVLKKS
KGLEAPQEGGEEKSVGNVEISESLPTTEEQDAGDETQGFKEEASDTEKDETMLSGEQVED
PAVIATNQAESQIDRTDGADDTLGRPSEVSTPDNESKFQVEQEREQLAADEREEGELIAD
PEDVGNLEGVSNLLMGSTENLEPQGESLVGTDEDALLTPTDTGEIESSQLPDDDKNDEVD
ATEELSESSDKLNDGGDQVATETDQAVDAVVTGEKPSSSSVDSSISKEGGPGDTAAAETE
EGKQVSPVNRSSRTINLNERARERASLRQAGMLSSTMPRGRGRAPRGRGGRNVRGGRGQT
PGSQG
NT seq 6138 nt   +upstreamnt  +downstreamnt
atgccgttgtttatgtcggacgaggaatacgagcggtgctcgaacgacgccgttttggta
tctgaaaaagccgatgaattcatacgcgatttatacaatcaactggagactgtgaaagcg
caggctgatgctgcttccgttactgctgaacagagttgttccttcctcgaacagaagtac
ctctcgcttaattcggagtactctgagcttcaatcgcagtactctgagcttaactcgtcg
ttcgagagacgcctatctgaactctctcaagtacaagccgagaagcagcaagttcacctc
caatctattggaaaggatggagatgtggaccggttatccacagaggcttcagaactgcgg
aaaacgaagaggcagttgatggaattggtggagcagaaagacttggagatcagtgagaaa
aattccactatcaaaagctatcttgataagatacttcatttgactgaaactgctgcggct
agggaagcgcgggtctgtgacttggagactgaagtatcacgctctcaggcttcttgttcg
cggcttttgcaggagaaggagcttgttgagaggcataatgcatggctgaatgatgagtta
acggccaaggtcaatgatctcatgaagctgcgtagagtgcattctgagcttgaggcagat
atgtctgccaaacttgctgatgccgagaaaaaacttaatgaatgtgataggtgcttgaag
aggaaagaggaacaggtgagggaaatggagttaaagttcacttctctagagcacgattta
ttaacttccaaggatgtagcagctgcgaaagaggagcaaatgtctggggagattgcaacc
ttaaacaagcttgtggaactgtacaaggagagttctgaggagtggtctaaaaaggcagga
gaacttgaaggagtaattaaggctttagagagtcatggaaaccaaatagagaatgactat
aaagagaggcttgaaaaagaagtatctgcaaagaaagaactagaggaggaggttgcatgc
ttgaaaaataagcttgtgaaaagcgaagcagaattgaaaattaggggagaagatacactg
aaacttcttcctttgaattattttacgagggaatcattgccaaactcagttgaaactagt
gacatggttgaggatgatcacatggttgtacctagtctacctgttggtgtttcaggaacc
gcattagcagcttcacttcttcgggagggttggggtctggctaagatgtacacaaaatat
caggaagctgttgatgctctacgacatgaacaattgggaagaaaacaagctcaagctgta
ttagagcgtgtactatgtgaaatagaggagaaagctggagttatcttggacgagcgagca
gaacatgaaagactggaagatgcttactctgtgctaagtgaaaaaatgcagcattccctc
tctcagcaagctgatttagagaggaatgttctggaattaaacgctgatctgagaagtcgt
gaccgtgattatgcagttgctcaggcagagatagttgacctccaagaacaggtgacagtg
cttttaaaggaatgtcgtgatatacaactccgtggtggatcagtgggacctaaaaatgat
tattctgtggtgtcagattctgtatttatgtttggtgctgaatctaatgctgataatgct
ggaaggctgttgagctacaaggacataaacagtctggttgaacaaaatgtccagctaaga
ggcttagttcgcagccttagtgaccagattgagaacagagagttagagttgaaggaaaag
tatgagaaggagcttcagaagcatattgatgaagcttcctccaaggttaatgctgtactg
gaaagagctgacgaacagggaaggatgatcgaatcactccatacagctgtggcaatgtac
aaacggctttatgaagagcatagagttcattcgtctgatactcaatctcaaaatttggcg
gaggttgaaagacaggaagtgatgcttttgcctgatgattcacatgaagctttagggaga
gcacaagaacgggcttttgagcgtgtaaaatgtctcgaagaagagtcatcaagattgcgg
agcgagttgatctctcttcgatccgagcgtgagaagtcagctttggaagcacagtttgct
cgagataaacttgacagatatgtgaaagattttgagctccagagagaggagcataatgct
gtcctcatgagaaatgttgagttctcacagttgatagttgaccaccagaagaaactgcga
gaaagttatgagtcattgaatgctgctgaggagctttctcgaaagctaaagatggaggtt
tctgttctaaagaacgaaaaggatatgctgataaatgccgagaagagagcttctgatgaa
gtatgtaatttgtcacagagggtgcacagtttgcaggcccatttagatacattgcagagt
acagaaaacgttcgtgatgaggcaagagctgctgagaggaaaaggcaggaagagtatatt
aaatgcattgagaaagaatgggctgaggctaagaaagaagtgcaagaagagcgtgataaa
gttcgaaaccttatgcttgagcgagaaagtgattttaagaatgcattgagacgagccgag
gaaatggggaaagaattggccagtacttcacgttctttggctgctgccgaatctagagct
gttattgctgaggcacgatctgctgatttagaggaaaaactgaaagcttcacaaggaaag
atgtctgagagagctgatgaaggtggtccttcctcttctactgagctttctggggacatg
cactctgctgaagaagttaaaacactcaaagaggagatgcaggctaacaaaaatcacatg
ctgcaatataaaagcatagctcaggcgaatgaagaagcattgaagcagttggaattggcc
tatgaggacctcaaagtggaagctgatatagtgaaaaaatcaatggaagaggaagcttta
tcgcttaggaaacatattactgatcttgaaaatgaatgtactgtgaaatcaattgaagca
gcttctgcaattgcagggaaagaagaagctgttgctgctactttagctgaaatatccagt
ctgaaagaagataactctgctaagatgtcacagatttcaaatttggaggctcaaataact
gctttgaaagatgatttggacaaagagcatcaaagatggcgtgccgctcaagttaattat
gagagacaggtaatcctgcagtcagaaacaattcaagaactgactagaacatctcaagct
ttggctgccttacaagaagaatcatctgagctccgtaaaatctcagatattctaaaaact
gaaaataatgaattgaaggccaagtggggggcagagatgtcggcgctagaagtatcaaaa
actgaagctgagaagaagtacactgaggctaatgaacagaacaaggtattacttgatcgg
cttgagggtttgcacattaaactggctgagaaggaccgtgaatctttaggtacatcttct
ggaagcacaacggccgagagtgatgatgggttgatgaatgtagtgaattatctaagacgg
tctaaggatattgcagaaacagaaatttctttgctgagacaggaaaaacttcggttgcaa
tcgcaactcgagaacgctcagaggagggcagatatagcagaagcatcacttaattctgag
cgagagaattcaagagctcaggttttaaatgaagaggagtttaaagcactgcagcttcag
gttagagaactgaacttacttcgtgaaagtaacttgcaattgagagaggagaacaagcac
aactttgaagaatgccagaaacttcgtgaagctgctcagaagatgaagattgaagtagag
ggtctgcagaagctcctcaatgaaagacaagaaaatgtggaggcttgtaggaaagagatt
gaaatgcagaggctggataaagagcagcttgagagaagggttaatgagttggttgagagg
tataagagttttgatctggaagaatatgctagtctgaaagaagctgctcaacagatgcaa
gtgaatttgagagaaaaggatgcagaactggagaagattaagaagaccatatctgagcag
cagaatctggtttctagcttagaacaagacctcacgaggagcagaacagaattgagtcag
agggaattgagaatcaacgaggttttgcaagctgaggcttctctgaaatccgaagttgat
aaactcagaaggttaattgctcaactgaagaagagggcggagaacttatcaaaggaaaag
gacaacatatcaaaggaaaaggatgatttggctagggagaatcaagctctctccaaacaa
ttggaagatgctaaactggggaaaagaactgccgatgctgcagatgaacaggccttgaaa
gacaaagaaaaggagaaagacaccagaatccaggggcttgagaagatggcctttcaactc
aaagaagagttgaaacaagggaaattaaagcgtttgaagactcaaaagacaataagtgac
tcctatgaaactgtgactcagcaacggtccaagctattagatgaactggacaagcataag
caggctttgaagacgcttaccgatgaagttgagaagataaggcaagccaaaaacagtcaa
tcagagggcacatcagtggatcaactcctttccgggactcacttagaggacttcactgct
gcatattttcaggctgtagatgagtttgaaagggttgcacgtggtgagctcggggctaca
ggtgccaccgacatttctgctccagatgcttctgtttctggctctgttgtacctggtcca
gcagctacgccttcgccaccagctagcttgttgacttccactcctgtggtgggaaaagtt
gttttatcaaagatgacctctgaaactcgtaaaacaggaaggaggttggttcgacctcgc
attacaaagccagaagaaccttcagctgatgtagagatgcaagatactgatgtatccagc
aacagtgggaagcacataacaacacctcaaaatgcagaaaatctagagaatgcaacatta
gcaactcaaccaccaattcgcaagcgcccttctgcagcgtctacctcagagttacaagaa
gagtcttctgccacgggtgaaccctgcttagatgtggctcaacctgtgcttaagaagtcc
aaaggtctagaggcacctcaagaaggtggtgaagaaaaatctgttggtaatgtagaaatt
tcagaatctctgcctactacagaggaacaggatgctggagatgaaacccaaggtttcaaa
gaggaagccagtgatactgagaaggatgagactatgctttctggcgagcaggttgaagat
ccggcagttattgcaacaaatcaggctgagtcacagattgatagaacagatggtgcagat
gatactttgggaaggcctagtgaagtgtcaactccagataatgaatcaaagtttcaggtg
gaacaagagagagagcagctagcagcggacgaaagggaagagggagagctaattgctgat
cctgaagatgttggaaatctcgagggagttagcaatttattaatgggaagcacagaaaat
ttagaacctcagggtgaaagcttagttggtactgatgaagacgccttgcttactccaaca
gacaccggggagattgaatcttcccagctcccagatgatgataagaatgatgaagtcgat
gcaacagaagagctatctgaaagctctgataagttgaatgatggcggtgaccaggttgct
actgaaactgatcaggctgtggatgctgttgttactggtgagaaaccatcaagcagttca
gttgacagtagcatttcaaaagaaggggggccgggtgacactgctgcagctgaaacagaa
gaagggaaacaggtttcacctgtcaataggagctcaagaaccataaacttgaatgagagg
gctagagaaagggcttcccttaggcaggctggtatgctttcctctacgatgccaagaggc
cgtggccgagctcctcggggtcgtggtgggcgcaatgtgcgtggtggtcgcggtcaaacc
cctggttcacagggttaa

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