Nicotiana sylvestris (wood tobacco): 104243124
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Entry
104243124 CDS
T05026
Name
(RefSeq) nuclear-pore anchor
KO
K09291
nucleoprotein TPR
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104243124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104243124
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104243124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoprot-TPR
TPR_MLP1_2
TPR
Motif
Other DBs
NCBI-GeneID:
104243124
NCBI-ProteinID:
XP_009796577
UniProt:
A0A1U7XX72
LinkDB
All DBs
Position
6:141612234..141620658
Genome browser
AA seq
2045 aa
AA seq
DB search
MPLFMSDEEYERCSNDAVLVSEKADEFIRDLYNQLETVKAQADAASVTAEQSCSFLEQKY
LSLNSEYSELQSQYSELNSSFERRLSELSQVQAEKQQVHLQSIGKDGDVDRLSTEASELR
KTKRQLMELVEQKDLEISEKNSTIKSYLDKILHLTETAAAREARVCDLETEVSRSQASCS
RLLQEKELVERHNAWLNDELTAKVNDLMKLRRVHSELEADMSAKLADAEKKLNECDRCLK
RKEEQVREMELKFTSLEHDLLTSKDVAAAKEEQMSGEIATLNKLVELYKESSEEWSKKAG
ELEGVIKALESHGNQIENDYKERLEKEVSAKKELEEEVACLKNKLVKSEAELKIRGEDTL
KLLPLNYFTRESLPNSVETSDMVEDDHMVVPSLPVGVSGTALAASLLREGWGLAKMYTKY
QEAVDALRHEQLGRKQAQAVLERVLCEIEEKAGVILDERAEHERLEDAYSVLSEKMQHSL
SQQADLERNVLELNADLRSRDRDYAVAQAEIVDLQEQVTVLLKECRDIQLRGGSVGPKND
YSVVSDSVFMFGAESNADNAGRLLSYKDINSLVEQNVQLRGLVRSLSDQIENRELELKEK
YEKELQKHIDEASSKVNAVLERADEQGRMIESLHTAVAMYKRLYEEHRVHSSDTQSQNLA
EVERQEVMLLPDDSHEALGRAQERAFERVKCLEEESSRLRSELISLRSEREKSALEAQFA
RDKLDRYVKDFELQREEHNAVLMRNVEFSQLIVDHQKKLRESYESLNAAEELSRKLKMEV
SVLKNEKDMLINAEKRASDEVCNLSQRVHSLQAHLDTLQSTENVRDEARAAERKRQEEYI
KCIEKEWAEAKKEVQEERDKVRNLMLERESDFKNALRRAEEMGKELASTSRSLAAAESRA
VIAEARSADLEEKLKASQGKMSERADEGGPSSSTELSGDMHSAEEVKTLKEEMQANKNHM
LQYKSIAQANEEALKQLELAYEDLKVEADIVKKSMEEEALSLRKHITDLENECTVKSIEA
ASAIAGKEEAVAATLAEISSLKEDNSAKMSQISNLEAQITALKDDLDKEHQRWRAAQVNY
ERQVILQSETIQELTRTSQALAALQEESSELRKISDILKTENNELKAKWGAEMSALEVSK
TEAEKKYTEANEQNKVLLDRLEGLHIKLAEKDRESLGTSSGSTTAESDDGLMNVVNYLRR
SKDIAETEISLLRQEKLRLQSQLENAQRRADIAEASLNSERENSRAQVLNEEEFKALQLQ
VRELNLLRESNLQLREENKHNFEECQKLREAAQKMKIEVEGLQKLLNERQENVEACRKEI
EMQRLDKEQLERRVNELVERYKSFDLEEYASLKEAAQQMQVNLREKDAELEKIKKTISEQ
QNLVSSLEQDLTRSRTELSQRELRINEVLQAEASLKSEVDKLRRLIAQLKKRAENLSKEK
DNISKEKDDLARENQALSKQLEDAKLGKRTADAADEQALKDKEKEKDTRIQGLEKMAFQL
KEELKQGKLKRLKTQKTISDSYETVTQQRSKLLDELDKHKQALKTLTDEVEKIRQAKNSQ
SEGTSVDQLLSGTHLEDFTAAYFQAVDEFERVARGELGATGATDISAPDASVSGSVVPGP
AATPSPPASLLTSTPVVGKVVLSKMTSETRKTGRRLVRPRITKPEEPSADVEMQDTDVSS
NSGKHITTPQNAENLENATLATQPPIRKRPSAASTSELQEESSATGEPCLDVAQPVLKKS
KGLEAPQEGGEEKSVGNVEISESLPTTEEQDAGDETQGFKEEASDTEKDETMLSGEQVED
PAVIATNQAESQIDRTDGADDTLGRPSEVSTPDNESKFQVEQEREQLAADEREEGELIAD
PEDVGNLEGVSNLLMGSTENLEPQGESLVGTDEDALLTPTDTGEIESSQLPDDDKNDEVD
ATEELSESSDKLNDGGDQVATETDQAVDAVVTGEKPSSSSVDSSISKEGGPGDTAAAETE
EGKQVSPVNRSSRTINLNERARERASLRQAGMLSSTMPRGRGRAPRGRGGRNVRGGRGQT
PGSQG
NT seq
6138 nt
NT seq
+upstream
nt +downstream
nt
atgccgttgtttatgtcggacgaggaatacgagcggtgctcgaacgacgccgttttggta
tctgaaaaagccgatgaattcatacgcgatttatacaatcaactggagactgtgaaagcg
caggctgatgctgcttccgttactgctgaacagagttgttccttcctcgaacagaagtac
ctctcgcttaattcggagtactctgagcttcaatcgcagtactctgagcttaactcgtcg
ttcgagagacgcctatctgaactctctcaagtacaagccgagaagcagcaagttcacctc
caatctattggaaaggatggagatgtggaccggttatccacagaggcttcagaactgcgg
aaaacgaagaggcagttgatggaattggtggagcagaaagacttggagatcagtgagaaa
aattccactatcaaaagctatcttgataagatacttcatttgactgaaactgctgcggct
agggaagcgcgggtctgtgacttggagactgaagtatcacgctctcaggcttcttgttcg
cggcttttgcaggagaaggagcttgttgagaggcataatgcatggctgaatgatgagtta
acggccaaggtcaatgatctcatgaagctgcgtagagtgcattctgagcttgaggcagat
atgtctgccaaacttgctgatgccgagaaaaaacttaatgaatgtgataggtgcttgaag
aggaaagaggaacaggtgagggaaatggagttaaagttcacttctctagagcacgattta
ttaacttccaaggatgtagcagctgcgaaagaggagcaaatgtctggggagattgcaacc
ttaaacaagcttgtggaactgtacaaggagagttctgaggagtggtctaaaaaggcagga
gaacttgaaggagtaattaaggctttagagagtcatggaaaccaaatagagaatgactat
aaagagaggcttgaaaaagaagtatctgcaaagaaagaactagaggaggaggttgcatgc
ttgaaaaataagcttgtgaaaagcgaagcagaattgaaaattaggggagaagatacactg
aaacttcttcctttgaattattttacgagggaatcattgccaaactcagttgaaactagt
gacatggttgaggatgatcacatggttgtacctagtctacctgttggtgtttcaggaacc
gcattagcagcttcacttcttcgggagggttggggtctggctaagatgtacacaaaatat
caggaagctgttgatgctctacgacatgaacaattgggaagaaaacaagctcaagctgta
ttagagcgtgtactatgtgaaatagaggagaaagctggagttatcttggacgagcgagca
gaacatgaaagactggaagatgcttactctgtgctaagtgaaaaaatgcagcattccctc
tctcagcaagctgatttagagaggaatgttctggaattaaacgctgatctgagaagtcgt
gaccgtgattatgcagttgctcaggcagagatagttgacctccaagaacaggtgacagtg
cttttaaaggaatgtcgtgatatacaactccgtggtggatcagtgggacctaaaaatgat
tattctgtggtgtcagattctgtatttatgtttggtgctgaatctaatgctgataatgct
ggaaggctgttgagctacaaggacataaacagtctggttgaacaaaatgtccagctaaga
ggcttagttcgcagccttagtgaccagattgagaacagagagttagagttgaaggaaaag
tatgagaaggagcttcagaagcatattgatgaagcttcctccaaggttaatgctgtactg
gaaagagctgacgaacagggaaggatgatcgaatcactccatacagctgtggcaatgtac
aaacggctttatgaagagcatagagttcattcgtctgatactcaatctcaaaatttggcg
gaggttgaaagacaggaagtgatgcttttgcctgatgattcacatgaagctttagggaga
gcacaagaacgggcttttgagcgtgtaaaatgtctcgaagaagagtcatcaagattgcgg
agcgagttgatctctcttcgatccgagcgtgagaagtcagctttggaagcacagtttgct
cgagataaacttgacagatatgtgaaagattttgagctccagagagaggagcataatgct
gtcctcatgagaaatgttgagttctcacagttgatagttgaccaccagaagaaactgcga
gaaagttatgagtcattgaatgctgctgaggagctttctcgaaagctaaagatggaggtt
tctgttctaaagaacgaaaaggatatgctgataaatgccgagaagagagcttctgatgaa
gtatgtaatttgtcacagagggtgcacagtttgcaggcccatttagatacattgcagagt
acagaaaacgttcgtgatgaggcaagagctgctgagaggaaaaggcaggaagagtatatt
aaatgcattgagaaagaatgggctgaggctaagaaagaagtgcaagaagagcgtgataaa
gttcgaaaccttatgcttgagcgagaaagtgattttaagaatgcattgagacgagccgag
gaaatggggaaagaattggccagtacttcacgttctttggctgctgccgaatctagagct
gttattgctgaggcacgatctgctgatttagaggaaaaactgaaagcttcacaaggaaag
atgtctgagagagctgatgaaggtggtccttcctcttctactgagctttctggggacatg
cactctgctgaagaagttaaaacactcaaagaggagatgcaggctaacaaaaatcacatg
ctgcaatataaaagcatagctcaggcgaatgaagaagcattgaagcagttggaattggcc
tatgaggacctcaaagtggaagctgatatagtgaaaaaatcaatggaagaggaagcttta
tcgcttaggaaacatattactgatcttgaaaatgaatgtactgtgaaatcaattgaagca
gcttctgcaattgcagggaaagaagaagctgttgctgctactttagctgaaatatccagt
ctgaaagaagataactctgctaagatgtcacagatttcaaatttggaggctcaaataact
gctttgaaagatgatttggacaaagagcatcaaagatggcgtgccgctcaagttaattat
gagagacaggtaatcctgcagtcagaaacaattcaagaactgactagaacatctcaagct
ttggctgccttacaagaagaatcatctgagctccgtaaaatctcagatattctaaaaact
gaaaataatgaattgaaggccaagtggggggcagagatgtcggcgctagaagtatcaaaa
actgaagctgagaagaagtacactgaggctaatgaacagaacaaggtattacttgatcgg
cttgagggtttgcacattaaactggctgagaaggaccgtgaatctttaggtacatcttct
ggaagcacaacggccgagagtgatgatgggttgatgaatgtagtgaattatctaagacgg
tctaaggatattgcagaaacagaaatttctttgctgagacaggaaaaacttcggttgcaa
tcgcaactcgagaacgctcagaggagggcagatatagcagaagcatcacttaattctgag
cgagagaattcaagagctcaggttttaaatgaagaggagtttaaagcactgcagcttcag
gttagagaactgaacttacttcgtgaaagtaacttgcaattgagagaggagaacaagcac
aactttgaagaatgccagaaacttcgtgaagctgctcagaagatgaagattgaagtagag
ggtctgcagaagctcctcaatgaaagacaagaaaatgtggaggcttgtaggaaagagatt
gaaatgcagaggctggataaagagcagcttgagagaagggttaatgagttggttgagagg
tataagagttttgatctggaagaatatgctagtctgaaagaagctgctcaacagatgcaa
gtgaatttgagagaaaaggatgcagaactggagaagattaagaagaccatatctgagcag
cagaatctggtttctagcttagaacaagacctcacgaggagcagaacagaattgagtcag
agggaattgagaatcaacgaggttttgcaagctgaggcttctctgaaatccgaagttgat
aaactcagaaggttaattgctcaactgaagaagagggcggagaacttatcaaaggaaaag
gacaacatatcaaaggaaaaggatgatttggctagggagaatcaagctctctccaaacaa
ttggaagatgctaaactggggaaaagaactgccgatgctgcagatgaacaggccttgaaa
gacaaagaaaaggagaaagacaccagaatccaggggcttgagaagatggcctttcaactc
aaagaagagttgaaacaagggaaattaaagcgtttgaagactcaaaagacaataagtgac
tcctatgaaactgtgactcagcaacggtccaagctattagatgaactggacaagcataag
caggctttgaagacgcttaccgatgaagttgagaagataaggcaagccaaaaacagtcaa
tcagagggcacatcagtggatcaactcctttccgggactcacttagaggacttcactgct
gcatattttcaggctgtagatgagtttgaaagggttgcacgtggtgagctcggggctaca
ggtgccaccgacatttctgctccagatgcttctgtttctggctctgttgtacctggtcca
gcagctacgccttcgccaccagctagcttgttgacttccactcctgtggtgggaaaagtt
gttttatcaaagatgacctctgaaactcgtaaaacaggaaggaggttggttcgacctcgc
attacaaagccagaagaaccttcagctgatgtagagatgcaagatactgatgtatccagc
aacagtgggaagcacataacaacacctcaaaatgcagaaaatctagagaatgcaacatta
gcaactcaaccaccaattcgcaagcgcccttctgcagcgtctacctcagagttacaagaa
gagtcttctgccacgggtgaaccctgcttagatgtggctcaacctgtgcttaagaagtcc
aaaggtctagaggcacctcaagaaggtggtgaagaaaaatctgttggtaatgtagaaatt
tcagaatctctgcctactacagaggaacaggatgctggagatgaaacccaaggtttcaaa
gaggaagccagtgatactgagaaggatgagactatgctttctggcgagcaggttgaagat
ccggcagttattgcaacaaatcaggctgagtcacagattgatagaacagatggtgcagat
gatactttgggaaggcctagtgaagtgtcaactccagataatgaatcaaagtttcaggtg
gaacaagagagagagcagctagcagcggacgaaagggaagagggagagctaattgctgat
cctgaagatgttggaaatctcgagggagttagcaatttattaatgggaagcacagaaaat
ttagaacctcagggtgaaagcttagttggtactgatgaagacgccttgcttactccaaca
gacaccggggagattgaatcttcccagctcccagatgatgataagaatgatgaagtcgat
gcaacagaagagctatctgaaagctctgataagttgaatgatggcggtgaccaggttgct
actgaaactgatcaggctgtggatgctgttgttactggtgagaaaccatcaagcagttca
gttgacagtagcatttcaaaagaaggggggccgggtgacactgctgcagctgaaacagaa
gaagggaaacaggtttcacctgtcaataggagctcaagaaccataaacttgaatgagagg
gctagagaaagggcttcccttaggcaggctggtatgctttcctctacgatgccaagaggc
cgtggccgagctcctcggggtcgtggtgggcgcaatgtgcgtggtggtcgcggtcaaacc
cctggttcacagggttaa
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