Nicotiana sylvestris (wood tobacco): 104243459
Help
Entry
104243459 CDS
T05026
Name
(RefSeq) asparagine--tRNA ligase, cytoplasmic 1-like
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
104243459
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nsy01007
]
104243459
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nsy03016
]
104243459
Enzymes [BR:
nsy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
104243459
Amino acid related enzymes [BR:
nsy01007
]
Aminoacyl-tRNA synthetase
Class II (A)
104243459
Transfer RNA biogenesis [BR:
nsy03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
104243459
Prokaryotic type
104243459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
Desulfoferrodox
Leu_zip
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
104243459
NCBI-ProteinID:
XP_009796950
UniProt:
A0A1U7YDS2
LinkDB
All DBs
Position
3:57589848..57594493
Genome browser
AA seq
581 aa
AA seq
DB search
MSVDDSTPQVDKISLSDGVEEAQFSQRVPIRSILGRPDGGAGLAGKVVKIGGWVKTGREQ
GKGSFAFLEVNDGSCPANLQVIVDSAVYKLGDLVPTGTCVHVEGELKLPPEGAKQKVELR
VQKVLSVGTVDAGKYPLPKTKLTLEFLRDVVHLRPRTNTISAVARIRNALAYATHTFFQK
NGFLYIHTPIITTSDCEGAGEMFQVTTLISEAEKLEKELKENPAPSDSDIKVVEQLVKEK
GEAVARLKADKASREKAGSNIAAINKQISAAVGDLTRAKENLLKLQERFKLGERVKRSAG
IPKKDGNIDYADDFFARQAFLTVSGQLQVETYACALSSVYTFGPTFRAEQSHTSRHLAEF
WMVEPEIAFADLKDDMNCAEAYVKFLCQWLLDHCLDDMEFITKFIDKGALGRLRMVTSSK
FHRLTYTEAIAILEEASKTKTFENKVEWGIDLASEHERYLTEEHFKSPVIVFNYPKGIKA
FYMKVNEDKKTVAAMDLLVPKVGELIGGSEREEDYEVLRSRISDMGLPLEPYEWYLDLRR
YGTVKHSGFGLGFERMILFATGMENIRDVIPFPRYPGRADL
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcgacgattccacgccgcaggtggacaaaatctccctaagtgacggcgttgag
gaggctcaattctcccaacgcgttcctatccgttcaattcttggccgtcctgacggcgga
gctggactcgccggaaaagttgtgaaaattgggggttgggttaaaaccggtagggaacag
ggaaagggttcttttgccttcctggaagtgaatgatggatcatgccctgcaaatctacag
gtaattgtggatagtgctgtgtataaacttggagatttggtacctactggcacttgtgtg
cacgtagaaggtgagctgaagttacctcctgaaggtgcaaagcaaaaggttgagcttcgt
gtccagaaggttctgtctgttggtaccgttgatgctggcaagtatccattgcccaagact
aaattaactcttgagtttcttagagatgttgttcatctgcggcctcgaactaatactata
tctgcagttgcaagaatccgtaatgccttggcttatgccacccatacattctttcagaag
aatggctttctttatatccacacaccaatcatcaccaccagtgattgcgagggtgctggc
gagatgttccaggtcactacattgataagtgaagctgaaaaattggagaaggagctgaaa
gagaatcctgctccttcagattctgacattaaggttgttgaacagcttgtcaaagagaaa
ggagaggcagttgctaggctcaaagctgataaggcaagtagggaaaaagctggctccaac
attgcagccataaataagcagatcagtgctgcagtcggtgatctcacaagggctaaagag
aatctcctgaagttgcaagagagattcaaattgggagagagggtaaagcgctctgctggc
atacctaaaaaggatggaaacattgattacgctgatgatttctttgcacgtcaagccttc
ttgacagtatctggtcaactccaagttgaaacatatgcatgtgcactttctagtgtctac
acttttgggccaacttttcgagctgaacagtcccacacttccaggcatcttgcagagttc
tggatggtggagcctgaaattgcttttgctgatctcaaggatgatatgaactgtgctgag
gcatatgtgaaatttctctgtcagtggttgcttgaccattgtcttgatgacatggaattt
atcactaaatttatagacaaaggtgctctaggtagacttagaatggtcacctcatccaaa
ttccatcgcttaacttacacagaagcgatcgccattctggaagaagcatccaaaacgaag
acatttgagaataaagtagaatggggtattgacttggcatctgaacatgaaagatatttg
accgaagagcattttaaatcacctgttatagtgttcaactacccaaaaggcatcaaagca
ttttacatgaaggtgaatgaagacaagaagacagttgctgcgatggatctgcttgtacca
aaggttggagaactaattggaggtagcgaaagggaagaggattatgaggttctcagatca
aggatatcggatatgggtctgccattagagccatacgagtggtatcttgatttgagacgc
tatggtactgtcaaacatagtggttttggtttaggctttgagcggatgattcttttcgcc
acagggatggaaaacattcgagatgtgattccctttcccagatatccaggaagagccgat
ctataa
DBGET
integrated database retrieval system
