Nicotiana sylvestris (wood tobacco): 104243559
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Entry
104243559 CDS
T05026
Name
(RefSeq) ubiquitin receptor RAD23b-like isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03420
Nucleotide excision repair
nsy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104243559
09124 Replication and repair
03420 Nucleotide excision repair
104243559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
nsy03051
]
104243559
03400 DNA repair and recombination proteins [BR:
nsy03400
]
104243559
Proteasome [BR:
nsy03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
104243559
DNA repair and recombination proteins [BR:
nsy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
104243559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
CUE
Rad60-SLD
TECR_N
UBA_3
UBA_RAD5A
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
104243559
NCBI-ProteinID:
XP_009797063
UniProt:
A0A1U7YCU3
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Position
10:23372023..23377104
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AA seq
368 aa
AA seq
DB search
MKLTVKTLKGSHFEIRVQPSDTIIAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLL
ENNVSEDGFLVVMLSKSKTVGSSGTSSAPQPSAPTVKPTPAPEVTPAAPEPKDVASASDA
ATASLPTDNFSQAASNLVAGNNLEQTIQQIMEMGGGNWDKETVTRALRAAYNNPERAIDY
LYSGIPETAEVAIPVASSGGNSAIGTTTVPAAPVSGAPNSAPLNLFPQENVAGVGGAAAL
GSLDFLRNNQQFQALRSMVQSNPQILQPMLQELGKQNPQLLRMIQEHHQEFLQLINEPVD
GSDGDLFDQPEQDMPHTVSVTPQEQEAIERLEAMGFDRALVIEAFLACDRNEELAANYLL
EHAGDYED
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttacagtgaaaactctgaaaggcagtcacttcgaaattagggttcagccctcc
gataccattatcgcagtcaagaaaaacattgaggatatacaaggaaaagataattatcca
tgtgggcagcagttactgattcacaatggtaaggttttgaaggatgaaagcacattattg
gaaaataatgtttctgaagatggctttcttgttgtcatgcttagcaagagcaagactgtt
ggttcaagtgggacatcatctgcaccgcagccttcagctcctacagtcaaaccgactcca
gcacctgaagtgactccagcagcaccggagcctaaggatgttgcatcagcatctgatgct
gcaacagctagtcttccaactgataattttagtcaagctgcatcaaatctagttgctgga
aataatcttgaacagacaatacaacaaattatggaaatgggcggtggcaattgggataaa
gaaacagtgacacgggcacttagagcagcttataacaatcctgaaagggctattgattac
ctgtattcagggattcctgaaacagcagaagttgctataccagtagctagtagcgggggt
aattctgcaatagggactactacagtgcctgctgcccctgtttctggagcacccaattca
gctcctttaaatttgtttccgcaggagaatgttgctggtgttggtggtgctgccgccctt
ggatcccttgattttctcaggaataaccaacagtttcaagcattacgttctatggttcaa
tctaacccgcaaattctacagcctatgcttcaggaacttggaaagcaaaatcctcaactt
ttgagaatgatacaagagcaccatcaagagtttcttcaattaatcaatgaaccagtagat
ggttctgatggggacctatttgatcagcctgagcaggacatgccccacacagttagtgtc
actccacaagagcaggaggcgatcgagcgactcgaggcaatgggttttgatcgagctctt
gttattgaggcctttttagcttgtgatcgcaatgaggaactagctgcaaattatttattg
gagcatgcaggagattacgaagattga
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