Nicotiana sylvestris (wood tobacco): 104243565
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Entry
104243565 CDS
T05026
Name
(RefSeq) uncharacterized protein isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104243565
Enzymes [BR:
nsy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
104243565
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
EMC7_beta-sandw
Motif
Other DBs
NCBI-GeneID:
104243565
NCBI-ProteinID:
XP_009797073
UniProt:
A0A1U7Y546
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Position
5:complement(176190483..176200579)
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AA seq
662 aa
AA seq
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MGKNVQLSLYVSTVAFTFFLLVADCRPHNGRRLTTTTAVKLDIQTEQVTLSNGIANVTLS
IPDGLVTNISYGGIDNLLATQNVKNDRGYWDVFWNQTASRRVRKKFLGTSFEVIMDSENQ
AEISFKNTWNASESDELPLNFDIRFVMLRDTPGFYTYAIFERLEGWPLVYIENLRIVFKL
QQDMFHYMAISDERQRVMPMPVDRETGEVLDYKEAVLLTNPTNPDLKGEVDDKYFYVNDN
KDDRVHGWVGANPPVGFWMIIPSDEFRTGGPYKQDLTSHVGPTVLSVFVSRHYAGEDLVI
KFQQGEPWKKVIGPVCLYLNSDASAKDSPSMLWDDAKKRINQEVTSWPYDFPVSTDYIKS
NQRGAVRGQLFVNDSTTTLISASNASVGLAPPGDSGSWQRENKGYQFWIKADASGNFSIE
NVISGTYNLYATVPGIIGDYKYTSDVQVTPGSSIELGSLVYNPPRNGVTLWEIGVPDRTA
AEFFVPIPPPQFKVHVYQNNSESIFRQYGLWEQYSALYPDNDLIYNVGTNNYSTDWFFAH
VTRNIGNNTYNATTWRIIFSLESVDNTSNYTLQLALAAAQRAELQVRFNDGKLATPHFTT
GVIGGDNAIARHGIHGLYWLYSIEVQGNLFVNGTNTIFLTQAIATNPFQGVMYDYLRFEA
PH
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaatgtgcaactaagcttatatgtctcaacggttgcttttacattcttctta
ttagtagctgattgtcgtcctcacaatgggcgaagattgacaacaacgacagccgtcaaa
ttggacatacaaactgaacaagtgacactgagcaatggtatcgccaatgttactttgtca
ataccagatggtctcgtcacgaacatatcatatggtggaattgacaacttacttgcgacc
caaaatgtcaaaaatgatagagggtattgggatgttttctggaatcagacagcatctcga
agagttcgaaaaaagttcttaggaacaagtttcgaggtcataatggacagtgaaaaccag
gcagaaatttcttttaaaaatacatggaatgcttctgaatctgatgaacttccgttaaac
tttgacataaggtttgtgatgctgcgagacacacccggattttatacttacgctatattt
gaacgtttagaaggatggccccttgtctacatcgaaaatctaaggattgtcttcaagctt
caacaagacatgtttcattacatggctatctcggatgagaggcagagggtcatgccaatg
ccggtggatcgagagacgggcgaggtgcttgactacaaagaagctgttcttttgacaaat
ccaactaatccagatctaaaaggagaggtggatgacaaatatttctatgtaaatgataac
aaagacgatagagttcatgggtgggtaggtgctaatcctcctgtagggttttggatgata
attccgagtgatgagtttcgtaccggaggaccttacaaacaagatctcacttcacatgtt
ggtccaactgtactttctgtatttgtaagtagacattatgccggagaagatctggtaatc
aaatttcaacaaggagagccttggaaaaaagttattggccctgtatgcctgtatctcaac
tcagatgcttcagctaaggacagtccatccatgctttgggatgatgcaaagaaaaggatt
aatcaagaagtcacaagctggccctatgattttccagtttcaactgactacatcaaatct
aatcaaagaggagcagttagaggtcaacttttcgttaatgacagcactactactttaata
tcagcatccaacgcttctgtagggttagcaccaccaggagattctggatcttggcaaaga
gaaaacaaaggatatcagttttggattaaagcagatgctagtgggaatttttccatagaa
aatgtcatatctggtacatataacttgtatgcaaccgtcccgggaattattggggattac
aaatacacttctgatgtacaagttactccaggttctagtattgaattagggagtttggtt
tataatcctccacgaaatggagtcacactttgggaaatcggtgtgccagatcgcacagct
gctgaattcttcgtaccaattccacccccacaatttaaagttcacgtataccaaaacaat
tctgaatcaatatttagacagtatggtttgtgggaacaatatagtgctttatatcctgac
aatgatctcatctacaatgttgggactaacaattattcaacagactggttttttgctcat
gttacaaggaatataggaaataacacgtataatgctactacatggagaattatatttagc
cttgaaagtgttgacaatacgtcgaattacactctccaattggctcttgcagcagctcag
agagctgaactacaagttcgtttcaacgatggaaaattagcaacacctcactttacaaca
ggggtaatcgggggagataatgcaattgcaagacatggtattcatggattatattggctt
tacagcattgaagtacagggcaatctatttgtaaatggaacaaacacgatatttcttaca
caagcaatagctacaaacccctttcaaggagtaatgtatgattatcttcgttttgaagca
cctcattag
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