Nicotiana sylvestris (wood tobacco): 104243683
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Entry
104243683 CDS
T05026
Name
(RefSeq) prolycopene isomerase, chloroplastic
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy00906
Carotenoid biosynthesis
nsy01100
Metabolic pathways
nsy01110
Biosynthesis of secondary metabolites
Module
nsy_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
104243683
Enzymes [BR:
nsy01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
104243683
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GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
HI0933_like
GDI
Thi4
GIDA
Pyr_redox_2
FAD_binding_3
GMC_oxred_N
MCRA
Pyr_redox_3
Motif
Other DBs
NCBI-GeneID:
104243683
NCBI-ProteinID:
XP_009797222
UniProt:
A0A1U7XZ18
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Position
12:complement(108713966..108721012)
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AA seq
613 aa
AA seq
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MGTLNFMFPNSLLDGNCKIVALGDSKLRNNKKISSCFDPLRIGNCTDVQQLNGLSLGLNK
TKGRKGGIVSQLKAVVDKGVESYGVGEVEVNESGNCDAIIIGSGIGGLVAATQLAVKGAK
VLVLEKYVIPGGSSGFYQRDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCKLEVIPDP
TTVHFHLPNDLSVRVHREYDDFIQELVSKFPHEKEGIIKFYSECWKIFNSLNSLELKSLE
EPIYLFGQFFKKPLECLTLAYYLPQNAGDIARKYIKDPGLLSFIDAECFIVSTVNALQTP
MINASMVLCDRHFGGINYPVGGVGEIAKSLAKGLVNQGSQILYRANVTSIILDNGKAVGV
KLSDGRKFYAKTIVSNATRWDTFGKLLKAENLPKEEEAFQKAYVKAPSFLSIHMGVKADV
LPPDTDCHHFTLEDNWTNLEKPYGSIFLSIPTVLDSSLAPEGHHILHIFTTASIEDWEGL
SLKDYEAKKELVAERIIGRLEKTLFPGLKSSIVFKEVGTPKTHRRYLARDSGTYGPMPRG
TPKGLLGMPFNTTAIDGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADLGFEKKSEVLDS
GLLRLLCWLRTLA
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgggtaccttgaattttatgtttcccaattcacttcttgatggtaactgcaagattgta
gctttgggtgatagcaaactcagaaacaataaaaagataagttcttgttttgaccctttg
agaattgggaattgtactgatgtccagcagcttaatggcttgagtttggggctgaataag
actaagggaagaaaagggggtattgtttcacagttgaaagcagttgtagataaaggagtg
gagagctatggagttggtgaggtagaagtaaatgagagtggcaactgtgatgccattatt
atagggtcaggaataggtggattagtggcagcaacacagctagcagttaagggagctaag
gttttggttttggagaagtatgttattcctggtggaagctctggcttttaccagagggat
ggttatacttttgatgttggttcatcagtcatgtttggattcagtgataagggaaacctc
aatttgataactcaagcattggcagcagtaggatgtaaattagaagttatacctgaccca
acaactgtgcatttccacctacccaatgacctttctgtccgtgtacaccgagaatatgat
gacttcattcaagagcttgtgagtaaatttccacatgaaaaagaagggattatcaaattc
tacagtgaatgctggaagatctttaattctctgaattctttggaactgaagtctttggag
gaacccatctacctttttggccagttttttaagaagcccctcgaatgcttgactctcgcc
tactatttgccccagaatgctggtgacattgctcggaagtatataaaagatcccgggttg
ctgtccttcatagatgcagagtgttttattgtgagcacagttaatgcattacaaacacca
atgatcaatgcaagcatggttctatgtgacagacattttggaggaatcaactatcccgtg
ggtggagttggcgagattgccaaatctttagcaaaaggcttggttaatcagggaagtcag
atactttatagggcaaatgtcacaagtatcattttggacaacggcaaagctgtgggagtg
aaactttccgatggaaggaagttttatgctaaaaccatagtatcgaatgccaccagatgg
gatacttttggaaagcttttaaaagctgagaatctgccaaaagaagaagaagctttccag
aaagcttatgtaaaagcaccttcttttctttctattcacatgggggttaaagcagatgtt
ctccctccagacactgattgccaccattttacccttgaggataattggacaaatttggag
aaaccgtatggaagtatattcttgagcattcctactgttcttgattcatcattggcccca
gaaggacatcatattcttcacatttttacaacggcgagcatagaagattgggagggactc
tctctgaaagattatgaagcaaagaaagagcttgttgctgaaagaattataggcagactt
gaaaagacactcttcccagggctcaagtcatctattgtttttaaggaggtgggaacacca
aagacacatagacgataccttgctcgtgatagtggtacctatggaccaatgccacgcgga
actccaaagggattactaggaatgcctttcaataccactgctatagatggtctatattgt
gttggcgatagttgctttcctggacaaggtgttatagctgtagccttttcaggagtaatg
tgtgctcaccgagttgctgctgacttaggatttgagaaaaaatcagaggtgctggacagt
ggtcttcttagactactctgttggttaaggacactagcatga
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