Nicotiana sylvestris (wood tobacco): 104243774
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Entry
104243774 CDS
T05026
Name
(RefSeq) THO complex subunit 7A-like
KO
K13176
THO complex subunit 7
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104243774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104243774
03041 Spliceosome [BR:
nsy03041
]
104243774
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
104243774
Spliceosome [BR:
nsy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104243774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
SAB
SPATA1_C
MG280
Het-C
APG6_N
TTC3
DUF6231
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-GeneID:
104243774
NCBI-ProteinID:
XP_009797329
UniProt:
A0A1U7YEU6
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All DBs
Position
11:110627135..110630168
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AA seq
242 aa
AA seq
DB search
MPIKGRRIAGKGETTASHYAFGQLEDEIIIRHRLLTRTTTTRGEPPLKKLQKKFTTFVSE
IEKEADNCGDCERLAKAFLQELNTFEIPLLKSKIVIDANVREKENFNDLKGEINVQILQA
QADIEDLKRQLEESKVERKHKEEGEVIRKLIAMQPPRSETQKVLTELEKEIAALEAENTA
SSRTLDLRKKQFALLLHVVDELQNTIEEEQRSLVEEIRNVVDDHNKSGVEDATVGPEAMA
VD
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgccgataaaaggtagaagaattgctgggaagggggagacaacggcatcacattatgca
tttggccaacttgaagacgagataattattaggcatagacttctgactcggacaaccacc
actagaggtgaaccgccactgaagaaactccaaaagaagtttactacttttgtctcggag
atagagaaggaagctgataactgcggtgattgtgaaagacttgctaaagcattcttgcaa
gagctaaatacgtttgagattccgctcctaaagagcaaaatagtaatagatgcgaatgtt
agagaaaaggagaatttcaacgacctgaagggtgaaatcaacgtgcagattttacaggct
caggctgatatagaagatctcaagaggcaacttgaagaaagcaaggttgaaaggaagcat
aaagaagagggtgaggtgatcaggaaattgattgctatgcaacctccaagatcagaaact
cagaaggttttaacagagcttgagaaagagatagctgcgttggaagcagagaatactgct
agttcaaggacattggaccttcgtaaaaagcagtttgctcttttattgcatgtggttgat
gagttgcagaacacaatagaggaagagcagaggagtttggtcgaagagataaggaatgta
gttgatgatcataacaagagtggagtggaggatgctactgtgggtcctgaggcaatggct
gtggattag
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