Nicotiana sylvestris (wood tobacco): 104243836
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Entry
104243836 CDS
T05026
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy00040
Pentose and glucuronate interconversions
nsy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104243836
Enzymes [BR:
nsy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104243836
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
104243836
NCBI-ProteinID:
XP_009797403
UniProt:
A0A1U7Y2N2
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Position
11:complement(98726100..98728521)
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AA seq
439 aa
AA seq
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MAFVSGNSVLLILVISLASLVPNLHAGIAEFDAYLEKQAKEALNSSLAAYNEHPEEITDT
FNREVGDTLLNITSLRRHLKEKSSCMTTNPIDRCWRCDENWAKNRKKLAECARGFGHKTT
GGKAGRYYVVTDDSDDDVKDPKPGTLRHAVIQEEPLWIIFEKSMVIKLKEELMITSDKTI
DGRGVSIYIAYGAGLTIQFVHNVIIHNIRIHHIISTSGGMIRDSVKHIGIRTLSDGDGIS
IFGSNHIWIDHCTLSQCTDGLIDAIMASTAITISNCKFNHHNDVMLLGATDAFPQDSIMQ
VTVAFNRFGKGLIQRMPRCRWGFFHVVNNDYSHWQMYAIGGSANPTIISQGNRFKAANNP
NTKQVTKRDYAPESVWKNWQWVSEGDLFLNGAYFVESGPQNKKKSALTKPHRIKFKPGSY
AGRLTRYAGVRKCKIGTPC
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcctttgttagtgggaattcagttttgttaatattggtcatatcgttagcttcatta
gtcccaaatttgcatgccggaattgctgaatttgatgcatatttggaaaagcaagctaag
gaagcgctcaactcttcccttgctgcatacaatgaacatcctgaagaaatcactgataca
ttcaatagagaagtcggagacacattgttgaatattacaagcttaaggaggcatctaaag
gaaaaaagtagttgcatgacaaccaatccaattgacagatgctggaggtgtgacgaaaac
tgggcgaaaaacaggaaaaagctagcagaatgcgctcggggattcggccacaaaacgact
ggtggtaaagcaggaaggtactatgttgtaaccgatgactcggatgatgacgtgaaggat
ccaaagccggggacccttcgtcatgctgtgatccaagaggagccattgtggattatcttt
gagaagtcaatggtaattaagttgaaggaagaactgatgattacaagtgacaagacgatc
gatggcaggggagtttctatttacattgcctatggcgctggtttaactatccaatttgtg
cataatgtcataatccacaacattaggattcatcatattatatctacctcaggtggaatg
ataagagattctgttaagcatattggtattaggacactgagtgatggagatggtatttct
atttttggttcaaaccatatttggattgaccactgcactttgtcccaatgtactgatggc
ctaattgatgccatcatggcttccactgcaatcaccatttctaactgcaaattcaatcat
cataacgacgtgatgcttttgggggcaactgatgccttccctcaagattcaataatgcaa
gtcacagttgcattcaatcggttcggaaagggattgattcagaggatgccaaggtgcagg
tggggattcttccatgttgtcaacaatgattactctcactggcaaatgtatgcaattggt
ggcagcgctaatccaaccattatcagccagggtaatcgtttcaaggccgccaacaaccct
aacactaagcaggtgactaagagggattatgcaccagaatctgtgtggaagaactggcaa
tgggtatcagagggtgatttgttcttaaatggggcttactttgtggagtcagggccacaa
aacaagaaaaaatctgcattgactaaacctcataggatcaagttcaagcctggttcatat
gcaggccgactcactcgctatgctggtgtgcgcaaatgcaaaatcggcacaccttgttaa
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