Nicotiana sylvestris (wood tobacco): 104244522
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Entry
104244522 CDS
T05026
Name
(RefSeq) E3 ubiquitin-protein ligase ATL42-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nsy04121
]
104244522
Enzymes [BR:
nsy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104244522
Ubiquitin system [BR:
nsy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
104244522
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-RING_16
Prok-RING_4
Prok-RING_1
DUF1600
zf-HC5HC2H
MARVEL
RING_XB3-XBAT31
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
104244522
NCBI-ProteinID:
XP_009798264
UniProt:
A0A1U7YGA0
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All DBs
Position
6:complement(8626363..8628197)
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AA seq
387 aa
AA seq
DB search
MYHLSMIVLAILQFLFLNIIKANGSTFQAMPSSQNAANNFQPSIAVVIGVLSIMFCLTFF
LLLYAKFCRRSPPPVHVTQVQDGLILPVTRSSSGIDKTIIESLPFFRFSLLKGSKNGLEC
AVCLSRFEDVEILRLLPKCKHAFHINCIDQWLEKHSSCPLCRHKVSAEDHLLLTYSNSFR
FLRNQSELREDSNLELYVQREENDINRSSRFSIGSISFKKSEKGVKEEELPIQENNIFDQ
TEEQDRVLELHKFNHRIVVSDVVLKHRWSNVSSSDLMFLNTEMINDMTSNRFSSSESRTN
LESTSKVLRQNEKRAMSEILICPRFEDHFNTRNCNIENCGISNNVKEERRKRIWLPIARR
TVQWFANRERIRYVAWGSDAGEIPANG
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtatcatttaagtatgatagttctagcaatccttcaattcctattcttaaacattatt
aaagccaatggctctacatttcaagcaatgccatcttcacaaaatgcagctaacaatttc
caaccaagtattgctgttgttattggtgtcctttccatcatgttttgcttaacatttttc
ctcctcctctacgcaaaattctgtcgtagatcgcctcctcctgtccacgttacgcaagta
caagatggactaattctaccagtaacaagaagttcctcaggtatcgataaaactataatc
gaatcacttccttttttcagattctcattgctcaaaggctcaaaaaatggtcttgaatgt
gctgtttgtttatcaagattcgaagatgtggaaattcttcgattgctaccaaaatgcaaa
catgcttttcacattaactgtattgatcaatggcttgaaaaacattcaagctgtcctctt
tgtagacataaagtaagtgctgaagaccatttattgttgacatattcaaatagttttaga
tttttaaggaatcaatctgagctaagagaagattccaacttagaactttatgttcaaaga
gaggaaaatgatataaatagatcatcaagattcagtattgggagcatcagtttcaagaaa
tctgaaaagggtgtcaaagaagaagaattgccaattcaagaaaacaatatttttgatcaa
actgaagaacaagacagagtattagaactacataagttcaatcataggattgttgtgtct
gatgttgtactaaaacatcgttggagcaacgttagttcgtcggatttgatgtttttgaat
actgaaatgattaatgatatgacaagcaatagattttcatcttcagaatcaagaaccaat
ttagaaagtacatcaaaagtgttgagacaaaatgagaaaagagccatgtcagaaattttg
atatgtccaagatttgaagatcatttcaatactaggaattgtaatatagagaattgtggt
atatcaaataatgtgaaggaggaaaggaggaagaggatttggcttccaattgcaagaaga
acagttcaatggtttgctaatagggaaagaataaggtatgtagcttggggatcagatgcg
ggcgaaattcctgctaatggctga
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