KEGG   Nicotiana sylvestris (wood tobacco): 104244550
Entry
104244550         CDS       T05026                                 
Name
(RefSeq) protein DAMAGED DNA-BINDING 2
  KO
K10140  DNA damage-binding protein 2
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy03420  Nucleotide excision repair
nsy04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104244550
  09124 Replication and repair
   03420 Nucleotide excision repair
    104244550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:nsy04121]
    104244550
   03400 DNA repair and recombination proteins [BR:nsy03400]
    104244550
Ubiquitin system [BR:nsy04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     104244550
DNA repair and recombination proteins [BR:nsy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      104244550
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_EIPR1 Beta-prop_EML WDR55 Beta-prop_RIG_2nd Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_2nd WD_LRWD1 EIF3I Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 zf-Vps39_C
Other DBs
NCBI-GeneID: 104244550
NCBI-ProteinID: XP_009798299
UniProt: A0A1U7YGD5
LinkDB
Position
7:120371869..120379427
AA seq 554 aa
MPPQTRRSSFPKVVIERDTESEESSSEDEAVEEEEEEEEANVVVPEETIEEEASESKKKG
KTPITITLKKVCKVCKKTGHEAGFRGATYIDCPMKPCFLCKMPGHTTMTCPHRVATEYGI
VPAPRKNTTTSLEFVFQRQLQPRLPPIKPAYVIPDQVHCAVIRYHSRRVTCLEFHPTNNN
ILLSGDKKGQLGIWDFGKVHEKTIYGNIHNCILNNMKFNPTNGGSIYAASSDGTISCTDL
ETGISLSLMNLNPNGWEGPSRWRMLYGLDVNSDKSVVLVADNFGYLYMADMRSNNIISKP
TLIHKKGTKVVGLNCNPLQPDLFLSCGNDHFARIWDMRHLEAGSSLYNLEHKRVVSSAYF
SPQSGSKILTTSLDNRIRVWDSIFGNLDYPSREIVHSHDFNRYLTAFRAEWDPKDSSESL
VVIGRYISENYDGAALHPIDFINISTGQLVAEVMDPNITTISPVNKLHPREDILASGSSR
SLFIWRPKKLSNIAQPREEKRILLCGEASKKHTKKHDHNSDDDSDNDIFRGKNKGLKQKK
LPLKSSSYSSRKSR
NT seq 1665 nt   +upstreamnt  +downstreamnt
atgcctccacaaaccagaagaagttcgtttccgaaagtggtgatcgaaagagacaccgag
tccgaggaaagctcgtcggaggatgaggctgttgaagaagaagaagaagaagaagaagct
aatgtggttgtacctgaagagacaatagaagaagaggcgtcggagtcgaaaaagaaaggg
aaaacacccatcactattactctcaagaaagtttgcaaagtttgcaagaaaacaggtcat
gaagcagggtttaggggtgccacttacattgattgcccaatgaaaccatgttttctctgc
aaaatgcctgggcacaccacaatgacttgccctcaccgagtagctacagaatatggaata
gtcccagcgccacgcaagaacacgactacttctttggaatttgttttccaacgccagctt
caaccacggcttcctcccatcaagccagcttatgtgatcccagatcaagtccactgtgca
gttatcaggtaccacagtaggcgagtcacttgcttggagtttcatcctacaaacaacaat
attcttttatctggtgataagaaagggcaacttggtatctgggattttggtaaagtacat
gaaaagacaatatatgggaacatacacaattgtatacttaacaacatgaagttcaacccg
acaaatggtggttcaatttatgctgcttcatcagatgggacaataagttgcactgacctg
gagactgggatttccttgtcactaatgaaccttaatccaaatgggtgggagggaccaagc
cgttggaggatgctttatgggttggatgttaactcagataaaagtgttgtccttgttgct
gataattttggatatctgtacatggctgatatgcggagcaataacataataagcaaacct
actttgattcacaagaaaggaactaaagttgttggtctaaactgcaatcctcttcaacca
gatctatttctgagctgtgggaatgatcactttgctcgaatatgggatatgcgccacttg
gaagctgggtcttctctttataatcttgaacataaacgtgttgttagttctgcatatttt
tctccacaaagtggcagcaaaatacttactacttcgctggataatcggatccgtgtgtgg
gattcaatctttggcaaccttgattatccaagccgagaaattgttcacagtcacgatttt
aaccgatatcttacagcattccgagcagaatgggatccaaaggactcatcagagtctctt
gttgtcatcgggcgatacattagtgaaaattatgatggagctgctttgcatcccattgac
tttatcaacatcagtactgggcagttggttgccgaggtcatggacccaaacataacaact
attagtccggtgaacaagctacatccacgtgaagatattctggcatctggtagttcaaga
tctcttttcatttggaggcctaagaagctgtctaacattgcacaacctagagaagaaaag
agaattttattatgtggggaggccagtaagaaacataccaagaagcatgatcataacagt
gatgatgattctgacaatgatatatttagaggcaagaataagggcctcaagcagaagaaa
cttccattaaaatcgtcttcatatagttcacggaaaagccgttaa

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