Nicotiana sylvestris (wood tobacco): 104244572
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Entry
104244572 CDS
T05026
Name
(RefSeq) tRNAse Z TRZ4, mitochondrial-like isoform X1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nsy03016
]
104244572
Enzymes [BR:
nsy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
104244572
Transfer RNA biogenesis [BR:
nsy03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
104244572
Prokaryotic type
104244572
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Motif
Other DBs
NCBI-GeneID:
104244572
NCBI-ProteinID:
XP_070019057
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Position
11:complement(44983010..44991855)
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AA seq
499 aa
AA seq
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MSKPENNVRQDVCGSTSHQNTEAYVQILGTGMDTQETSPSVLLFFNNERFIFNAGEGLQR
FCAEHKIKLSQVDHICLTRVCSETAGGLPGLLLTLAGIQNGSPESTEHVDIWGPPNLDLL
VNAMKNFVPHATMVKAHIIPRSDNVMVHGNGAALASSLHAEELQAEGKFKAVSISAILLT
PTHLDGSHFSSNDTSIVYICNLHDIRGEFDPRKAKACGLKKRRKLGQLQNGISVKSDLLD
IEVHPDDVIGPPIPGPIVLIVDCPTEPHAQELLSAQSLNAYYSDSQSNSQETTKVVNCII
HLSPATVVSSPVYEKWMRKFGSAQHIMARTTRKHETTPILESNVRIATRLHYLCPQLFPA
PSLFSVQNDDVAAPNFKGSISKVCGISAENLLKFTLRPPRRLGLDRSSVQNRMTFSVFVK
ELLSEIPEIVDATKNISTFWHKPKEDEAELFTRQDSEVMTGDPSLAGHAAPRCLENVQRD
PSYPRSFYHFLSSETKFSL
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagcctgaaaataatgttcgccaggatgtttgtggcagcactagtcaccaaaat
accgaagcctacgttcagattctggggacaggaatggatacccaagaaacatccccgtct
gttctgctcttctttaacaatgaaagattcatatttaatgctggagagggattacaacgc
ttctgcgctgagcataagattaaattatctcaggtagaccacatatgtctcactcgtgtc
tgctcagagacagcaggaggacttccaggtttgctattgactttggctggcatacaaaat
ggaagtcctgagagtactgagcatgttgacatatggggtcctccaaatcttgatttattg
gttaacgcaatgaagaattttgtccctcatgctaccatggtcaaagcacatatcatccca
cgaagtgacaatgttatggttcatggaaatggagctgcactagcttcctcactacatgcg
gaggagctgcaagctgaaggcaagttcaaggcagttagtatatcagctattctcctaaca
ccgactcatttggatggatctcattttagttcaaatgatacctccattgtatatatttgt
aacctacatgacatcagaggggagtttgaccccagaaaggctaaagcttgcggactcaaa
aagaggagaaagcttggacaactgcaaaatggtatcagtgtgaagtcagatcttctagat
atcgaggtccatccagatgatgtaataggcccacctattcctggtcccattgtactgatt
gttgactgtccaacagaacctcatgcacaagagttactgtctgcacaatctcttaatgcc
tattattcagattcccaaagtaactcccaagagaccaccaaggttgtgaactgcatcatt
catttgagccctgctactgttgtcagcagtccagtttatgagaaatggatgaggaaattt
ggttctgcccaacatattatggcaagaactacaaggaagcatgaaacaactccaattcta
gaatctaatgtgagaatagccacaagactgcattatttgtgtccgcagctttttcctgct
cctagtcttttttctgttcagaatgatgatgttgcagcaccaaatttcaagggttctatc
tcgaaggtttgtggcatatctgctgaaaatctcttaaagttcaccttacgtcctcctaga
cgtctgggattggacagatcaagtgttcaaaataggatgaccttctcagtgttcgttaaa
gagttactttcagagattcctgagattgttgatgctacaaagaacataagcacattttgg
cacaaacctaaagaagatgaggcagaactgttcaccaggcaggacagtgaagttatgact
ggagatccatcgttagctggacatgctgcccctaggtgtctggaaaatgtccagagagat
ccatcatacccacgttctttttaccattttctatcttctgaaaccaaattctccctctaa
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