Nicotiana sylvestris (wood tobacco): 104244890
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Entry
104244890 CDS
T05026
Name
(RefSeq) putative DEAD-box ATP-dependent RNA helicase 29 isoform X1
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nsy03009
]
104244890
Enzymes [BR:
nsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104244890
Ribosome biogenesis [BR:
nsy03009
]
Eukaryotic type
Pre-60S particles
Helicases
104244890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
104244890
NCBI-ProteinID:
XP_009798712
UniProt:
A0A1U7Y3K3
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All DBs
Position
8:complement(17206460..17220613)
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AA seq
794 aa
AA seq
DB search
MAILVSSKAELKRREKEKKKAKSAGFESLGLSSNVFRGIKRKGYRVPTPIQRKTMPLILS
GIDVVAMARTGSGKTAAFLLPMLEKLKQHVPQAGVRALILSPTRDLALQTLKFTKELGRF
TDIRVSLLVGGDSMESQFEELAQSPDVIIATPGRLMHHLSEVDDMSLRTVEYVVFDEADC
LFSMGFAEQLHRILTHLGENRQTLLFSATLPSALAEFAKAGLRDPQLVRLDLDTKISPDL
KLAFFTVRHEEKHAALLYLIREQISSDQQTLVFVSTKYHVEFLNILLREEGIEPSVCYGD
MDHDARKIHISRFRARKTMVLIVTDVAARGIDIPLLDNVINFDFPPKPKLFVHRVGRAAR
AGRIGTAYSLLTSEDMPYLLDLHLFLSKPIRAAPTEEEVLQDMDGVRSKIDQAVANGGTV
YGRFPQTVLDLLSDRVREIIDSSTELETLQRPCMKAFGLYSKTKPKPSKESVRRVKDLPR
EGLHPLFKNDLGGTELSAMAFSERLKAFRPKQTILEAEGEAAKSKNQSQWVDVMKRKRAI
HEEVINKVRQQRSGVPAPEEDGSDPTPSERKEKQVSGSKRKAKSFKDEENFISSVPTNQH
FEAGLSVRGNRGFESNRLDAAVLDLVADDKNGLHKQKTTYHWDKRSKKYIKLNNGDRVTA
SGKRVQIKTEGGSKMKTHKTGIYKKWKDQSHKRVSVNGTNDGGSAAASTSLAGGPRGQGG
TRMFRGGRNNRSIPNAHVRSEIKDVEQVRKEREKKAQRASYLKTRKGKKFNKGGKRGNGN
GNGRGKGKGKGRQG
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggcgattctagtaagctccaaagcggagctaaagcgcagagagaaggagaaaaagaag
gcaaaatcagcagggtttgagtcattagggttaagttccaatgtattccgaggaatcaaa
cggaaaggttacagagttccgacgcctattcagcgcaaaacaatgccgctcatcctctcc
ggtatcgacgttgtcgctatggcccgtactggttctggtaaaacggcggcgtttctcctt
cccatgcttgagaaattgaagcagcatgtgcctcaagctggtgttagagcccttatttta
tctcctactagagatttggcacttcaaacacttaaatttacaaaagagcttggtcgattc
acagatattcgtgttagtttattggttggtggtgatagtatggaaagccaatttgaagaa
ttggcacaaagtcctgatgttataattgcaactcctggtcggctaatgcatcatttatcc
gaggttgatgatatgtcactgcgcactgtggagtatgtggtttttgacgaggctgattgt
ttatttagcatgggatttgctgagcaattgcatagaattctcacccatctaggtgagaat
cgccagactctgcttttcagtgcaactttacccagtgcccttgctgaatttgccaaggct
gggctgcgagatcctcagcttgtgcgtcttgatttggacactaagataagtccagacttg
aagcttgcatttttcactgtaagacatgaggaaaagcatgctgcacttctgtatctgatt
cgtgaacaaataagttctgatcagcagactttggtttttgtttccaccaagtatcatgtt
gagttccttaacattcttttaagggaagagggtattgaaccttctgtttgttacggtgat
atggatcacgatgctcgcaaaattcatatttctagatttagagcaagaaagacaatggtg
ctcattgtgaccgatgtggctgctagaggaattgatatcccactgcttgataatgttatc
aacttcgattttcctccaaaacctaaactttttgtgcatcgagttgggcgagctgcgagg
gctggtcgtattggcactgcttattctcttctcacatctgaagatatgccttacttgtta
gatcttcatctctttctgtctaaaccaatcagggctgcgccaactgaggaagaggtttta
caagatatggatggagtccggtccaaaatagatcaagcagttgccaatggaggaacggtc
tatggacgttttcctcaaactgttctagatctcctctctgatagagttcgggaaatcatt
gattcatcaactgaactagaaactctgcaaaggccctgtatgaaagcatttggcttgtat
tccaagacaaaaccaaagccttcgaaagagtccgttagaagagtaaaagatctaccacgt
gaagggttgcatccactgttcaaaaatgacctcggtggtactgaattatcagcaatggct
ttttctgaacgcttgaaggctttcaggcctaagcagacaatcctggaagctgaaggtgaa
gctgccaagtcaaaaaatcaaagtcaatgggtcgatgtgatgaagaggaaaagagctatt
catgaggaggtcatcaataaagttcgtcaacagcgctccggtgttcctgcaccagaggaa
gatggctctgatcccacaccttcagaacggaaggagaaacaagtttctggttctaaaagg
aaagcaaagagctttaaagacgaggagaacttcataagttcagtaccaacaaatcagcat
tttgaggctggactttccgtgagaggaaaccgaggttttgaatcaaataggttagatgct
gctgttctggatttggtagctgatgacaaaaatgggctgcataaacaaaagactacatat
cattgggataagaggagtaagaaatacatcaagcttaacaatggagatcgtgttacagct
agtgggaagcgtgtgcagataaagacagagggtggttctaagatgaagacccacaaaact
gggatatacaagaagtggaaagaccaatcacacaagagagtttctgttaacggaactaat
gatggtggctctgctgcagcatcaactagtttagctggtggtcctagaggacaaggtggt
acccgaatgttcagaggtgggagaaacaataggtcaatacctaacgctcatgtgcgatca
gaaattaaagatgtcgaacaagttcggaaggaaagagagaagaaggcccagagagcatct
tatttgaagactaggaaggggaagaagttcaataaaggtggtaaaaggggaaacggaaat
ggtaacggaaggggaaagggaaaaggaaagggaagacaaggttga
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