Nicotiana sylvestris (wood tobacco): 104245414
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Entry
104245414 CDS
T05026
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy00040
Pentose and glucuronate interconversions
nsy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104245414
Enzymes [BR:
nsy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104245414
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104245414
NCBI-ProteinID:
XP_070006991
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Position
7:complement(156093782..156106135)
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AA seq
363 aa
AA seq
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MGNHHPRYKHHHHHQQGPPFPVPPVPTAQSQNTVSTQMGLVLPYGQVDSSLRALAGQAEG
FGGSSIGGRDGHIYQVINLNDDGPGSLRDGCRKKEPLWIVFEVSGTIELRSYLSVSSYKT
IDGRGQRIKITGKGLRLKECEHVIICNIEFEGGRGPDVDAIQIKPKSRHIWIDRCSLSDY
DDGLIDITRESTDITVSRCHFSKHDKTMLIGADPSNCTDRCMRVTIHHCFFDGTRQRHPR
VRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKVAFKYLTEKAADKEEGCT
GSIKSEDDLFVCGTQAGLLSTCSGNNIFNPSEFYQTWTVERPSDALKHYLQHCTGWQSIP
RPN
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggggaaccaccatccccgttacaaacaccaccatcaccatcaacaaggccccccattt
cctgtgcctccagtacccacagctcaatcccagaacacagtgagtactcaaatgggtttg
gttttgccttatggtcaagttgactctagcttgcgtgctctagctggtcaagctgagggc
tttggcggttcttccattggtggtcgtgatggtcatatttatcaagttattaatctcaat
gatgatgggccaggatcacttcgagatggatgtcgtaaaaaagaacctctatggatcgtc
tttgaagtttcagggacgattgaactccgatcttatttgagtgtgtcgtcttacaaaact
attgatgggcgaggccaaagaatcaaaatcacagggaaaggtttgaggttgaaagaatgt
gaacatgtgatcatctgcaatatagagtttgagggaggcagaggacccgatgttgacgcc
attcagattaaaccaaagtcgaggcatatttggatagatcgttgtagccttagtgactat
gacgatggtttaattgacatcacaagggagagcacagatattactgtttctaggtgtcac
ttttcaaagcatgataagaccatgcttattggagcagatccttctaattgtaccgacaga
tgtatgcgggtcaccattcaccactgcttttttgatggaactagacagcggcatcctcgt
gttagatttggcaaagtacatttgtacaacaactacaccaggaactggggaatttatgct
gtttgtgcaagtgtagaatcacagatatattcccagtgcaacatatatgaagctggacaa
aaaaaggtggcctttaaatatctcacagagaaggcagctgacaaggaggaaggatgcact
ggtagcattaagtctgaagatgacttgtttgtttgtggaactcaggctggtttattgtct
acttgcagtggaaataacatcttcaatccatccgaattctaccaaacctggactgttgaa
cgtccgagtgatgctctcaaacactaccttcaacattgtaccggatggcagtctatcccg
cggccaaattga
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