Nicotiana sylvestris (wood tobacco): 104245914
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Entry
104245914 CDS
T05026
Name
(RefSeq) nuclear pore complex protein NUP62
KO
K14306
nuclear pore complex protein Nup62
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104245914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104245914
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104245914
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Motif
Other DBs
NCBI-GeneID:
104245914
NCBI-ProteinID:
XP_009799920
UniProt:
A0A1U7YM59
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Position
1:105314165..105324111
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AA seq
758 aa
AA seq
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MSTGFSFSSSSSPFSFSSNPSFSSTPNTAAATVSSSFSFSNPNPSPATSAPFGFGSSASS
ASSCPSFSFAGFGSSSTGASTASFGFSSSASSGSSPTPGLFGSSSGSGTTSNLLGSSSGS
GTTTNLFGSTTSASSSPLFGTTSATAAANSSPFGSSALFGSSSTPSRGLFGSVSGSGSSS
SLGLFGSSSSSLFSSPLTASSTATAATTTSTTFSSTTPFGFSGSASSASAFSSPAFSFAS
SAAASSASFAPSFSQSSAATTTSVSSAPGFSLATSSTSSAAPAAFSLSTPNSPAPAFPLS
ASSSAAPAFSLSAIVSSSPAPAFSLSASSSAAPAFSLSAKASSSPAPAFSFSTAFGTTPA
SVSSSSPSPFSASTSLSFSVTKGTGSSAAASSAPSLTTAFPFNTSSSTASSSATPVSKPA
STGFSIASSPLFSTVTTTTTTSISTTATATGASSAVSTTSGTGTGSSLTFPAFNAAPSSS
ASTTSAAAPTTSFSLSSKTSASTAAVPSFSVPSTTSGAATSSAAPTSSALTATASSGTTS
TSTVAATSTPKLPSEITGKSVEEIIKEWNAELQERAAKFRKQANAIADWDKRILQNRDIL
LRLESEVAKVVETQTSLERQLELIETHQEEVDKALQSMEEEADRIYKDERGVILDDEAAS
TRDAMYEQAEFVEREMEKMTEQIKSIINTLNASQGGELEAPDGMTPLDVVVRILNNQLSS
LMWIDEKAEEFSSRIQKLANEGSAANRELTGPKLWLTR
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaggcttttcattctcctcctcttcttcgcccttctccttctcttcaaacccg
tctttttcctccacgcctaacaccgctgctgctaccgtttcttcctcattttccttctca
aaccctaaccctagccccgccacgtctgctccttttggatttggctcttctgcttcttca
gcctcttcctgtccttccttttctttcgccggtttcggctcttcttctaccggtgcttct
acagcgtcgtttggcttttcatctagtgcttcttctggttccagtcccacacccggctta
ttcggatcttcttccggttcgggtaccacttcaaacttactcggatcttcgtccggttct
ggtaccactacgaacctgttcggatccactacatctgctagtagttccccattgtttggg
acaacttcagctaccgccgctgccaattcatcccccttcggtagttctgcacttttcggg
tcgtcaagtactccgtcgcggggcttgtttgggtcggtctctggttcgggttcaagttca
agcttgggcttatttggttcttcttcatcttctctgttttcatcaccattaactgcttct
tctactgcaactgcagcaactactactagcactactttttcttccaccactccattcggt
ttttctggttcggcctcatcagcatccgcattttcttcaccggcattttcgtttgccagc
tcagcagctgccagttcagcatcttttgccccgtcattttcacagtcaagtgctgcaacc
accacttcggtatcttctgcaccgggattttcactcgccacgtcatcaactagttcagca
gcacctgcagcgttttcattatcaacgccaaattcacctgcacctgcatttccattatca
gcgtcaagttcagcagcacctgcattttcattatcagcgatagtgtctagttcacctgca
cctgcattttcattatcagcgtcaagttcagcagcacctgcattttcattatcagcgaaa
gcgtctagctcacctgcaccagcattttccttttcaactgcatttgggaccacgccagct
tcagtctcttcatcatcgccatcgcctttttcagcttctacttctctgtcattttcagtt
acaaaagggacaggaagctctgcagccgcttcgagtgctccttcactgactactgctttt
ccatttaatacgtcttccagtactgcttcttcaagtgcaaccccggtgtccaaacctgct
agtaccggtttttcaattgcttcatcgcctttgttttcgacagttactactactactacc
accagcatttctaccactgcaactgctacgggagcttcctctgctgtttctacaactagt
ggaaccgggactggttcatctctgacatttcctgcatttaatgctgcaccctcttcttca
gcttcaacaacaagtgctgctgctccaaccacaagtttttcgctgtctagcaaaacatct
gcatcaactgcggctgtgccaagctttagtgtcccaagcacaacttctggcgctgcaaca
agttcagcagctccgacatcatcagccttgactgcaactgctagtagtgggactacttca
acttctactgtagctgccacttccacaccgaaattaccttcagaaattacaggaaagtct
gtagaagagatcatcaaggaatggaacgctgagctgcaagaacgcgctgcaaaatttaga
aagcaggctaatgcaatagctgactgggacaaaaggatcttgcagaaccgtgatattctt
ctcagactagagagcgaagttgcaaaggttgttgagacacaaaccagcttagagcgacaa
ctggagctaattgagactcatcaggaagaggttgacaaggcattgcaaagcatggaagaa
gaagctgacagaatttacaaagatgagagaggtgtgattcttgatgatgaagctgcatca
acaagggatgcaatgtatgaacaggctgagtttgtggagagggaaatggagaagatgaca
gagcagatcaagtcaatcattaatacacttaatgcgagccagggtggagaacttgaggca
ccagatggaatgacaccgcttgatgttgttgtccgaatcttaaacaatcaattgagttca
ctgatgtggattgatgaaaaggctgaagaattctcttctcgtattcagaagcttgcaaac
gaaggatctgctgccaatcgtgaattaacgggccctaaattatggttgactcgatga
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