KEGG   Nicotiana sylvestris (wood tobacco): 104246186
Entry
104246186         CDS       T05026                                 
Name
(RefSeq) protein RDM16 isoform X1
  KO
K12843  U4/U6 small nuclear ribonucleoprotein PRP3
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104246186
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nsy03041]
    104246186
Spliceosome [BR:nsy03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    104246186
SSDB
Motif
Pfam: PRP3 Prp3_C
Other DBs
NCBI-GeneID: 104246186
NCBI-ProteinID: XP_009800257
UniProt: A0A1U7Y802
LinkDB
Position
5:26892991..26898612
AA seq 854 aa
MEREKSNRRERASRDDDDDRRHHHRDRSKHHHRDDENRHRSDDRRGRDRERERHREKSHE
SEVVREKSYDREDSVERRHSHRRKDDREKREKSYEREDSVERRNAHKRKDRGEESVDKSN
GGDEKRARVSEDKKEERRERRRFDDKVKKEEEEDVEIDEERKGKRFEMRIVKEEPKPEPN
DNNGHGVGSIDNGVTMGPYNAALRTSPDKSSTRIDPPATKVSSISTTNENKGVNINRSHA
VPGKSSTDGAASDAGKSATLSLDAKGNAKALIQRQKELAAKLKKIPLLNKGADFTREGSS
QIGRKDSLYAASTDAGILPPPVASSNSGILPTPSSAPSTSTIAVASANTPPSGLPQVAGL
TVTAQNYDKVKRAHELFAKMGFRQDPEFPPLINMFPGQMPPEVTIQPKPARAPVLRLDAL
GREIDEQGNVVNVPKPSSTLKVNINKQKKESFQILKPELDVDPDKNPHFDPRMGIDKNKI
LRPKRMSFQFVEEGKWSHDAELIKLKQSQYGESRAKELRAKQMQLAKAKAEPVINPNLIE
VAERVITKEKPKEPIPDVEWWDAPLLRSGTYGGMVDGDLTDDMLKMEKITIYVEHPRPIE
PPAEPAPPPPQPLKLTKKEQKKLRTQRRLAREKERQEMIRQGLLEPPKPKVKMSNLMKVL
GSEATQDPTKLEMEIRSAAAEREQAHIDRNIARKLTPDERREKKERKLFDDPNIAPETIV
SIYRVNDLSHPQTRFKVDVNAQENRMTGCAVISEGISVVVVEGGKKSIKRYGKLMLRRID
WAAAVKKEDDEDEDDEDKPLNKCVLVWQGTVAKSSFHRFFVHECRTEAAARKVFADAGVP
HYWDLAVNFKDDEF
NT seq 2565 nt   +upstreamnt  +downstreamnt
atggagagagaaaaatcgaataggagagaacgagcatccagagacgacgacgacgaccgc
cgccatcatcatcgcgaccgttcgaagcaccaccatcgcgacgatgagaaccgacaccga
tccgatgatcgaagaggtcgcgatcgcgaacgcgaaaggcatcgcgagaaatcacacgaa
tcggaagttgtcagagaaaaatcttacgatagagaggattccgtggagagaaggcattcg
cataggaggaaagacgatagagagaaacgcgagaaatcgtatgagagagaggattcagtg
gagagaaggaatgcacataagaggaaagatagaggagaagagagtgtggacaagagcaat
gggggagatgagaagagagctagggtttcagaggataagaaggaggagagaagagagagg
aggagatttgatgataaagtgaagaaggaggaggaagaggatgtggaaattgacgaggaa
aggaaggggaaaagatttgaaatgagaattgtgaaggaagaaccgaaacccgagcccaat
gataataatggtcatggtgttggttccattgataatggcgtgacaatgggaccatacaat
gcagcattgaggacctcccctgataaatcttcgactcgtattgatcctcctgctaccaag
gtatcttcaatttctacaacaaatgaaaataagggagttaatattaacagatctcatgcg
gttcctgggaaatctagtacagatggggcagcttctgatgctggcaagagtgccacctta
tcccttgatgccaaaggaaatgcaaaggctctcatacaaaggcagaaggagctggcagca
aagcttaagaaaattcctttgctaaacaagggtgccgactttacgagagagggaagttca
cagattggtcgcaaggatagtctttatgccgcttcaacagatgcggggatattgccccca
ccggttgcatcttcaaattctgggatattacccactccaagttcagcacctagcacatcg
actatagctgtggcttctgcaaatacgccacccagtggcttgcctcaggttgcggggctc
acagtcacagcacagaactatgataaagtgaagcgtgcacatgagctttttgctaagatg
ggattccggcaggacccggagtttccccccctcattaacatgtttcctgggcaaatgcct
ccagaggttaccattcagccaaaacccgctagagcccctgttcttcgtttggatgcatta
ggcagggaaatcgatgaacagggaaatgtggttaacgtgcctaagccatctagcaccctt
aaggtgaatatcaacaagcagaaaaaagaaagcttccaaattctcaaacctgaacttgat
gttgatcctgataaaaatcctcattttgatccgaggatggggattgacaagaacaaaatt
ttgaggccaaagaggatgtcatttcagtttgtggaggaaggtaaatggtcccatgatgca
gaattaattaagttaaagcaaagccaatatggtgaatcacgagccaaagagttgagggca
aagcaaatgcaattggcaaaggcaaaagcagagcctgtcataaatccaaatcttattgag
gtggcagagagggttatcaccaaggaaaaaccaaaggaaccaatccctgatgttgagtgg
tgggatgctcctctgttacgatctggtacttatggtggtatggtcgatggtgacttaact
gatgatatgttgaagatggagaagatcactatttatgttgaacacccccgccctattgag
cctcctgctgaacctgctccacctcctccacaaccattgaagctgaccaagaaggagcag
aagaaactacgtacccagcgtcgactggctagggagaaagaaaggcaggaaatgatacgt
cagggcctgttagaaccaccgaaacctaaagttaaaatgagcaatcttatgaaagttctt
ggctcagaagccactcaggatcccacaaagcttgaaatggagatcagaagtgctgctgct
gagcgagaacaggctcatatagacagaaatattgctcgaaagctcactcctgatgaacgt
cgtgagaagaaagaaagaaaactatttgatgatccaaatatcgcaccggagacgatagtt
tcgatatacagagttaatgacctttcacaccctcaaactcgcttcaaggttgatgttaat
gctcaggagaatcgcatgactgggtgtgcggttatctcggaaggtataagtgtggtggta
gttgaaggtggtaaaaagtccatcaagcggtatgggaaacttatgcttaggcgaatagac
tgggctgctgctgttaagaaagaagatgatgaagacgaagatgatgaagataagcctctc
aacaagtgcgtgttagtctggcaagggactgttgctaaatcaagcttccataggtttttt
gttcacgagtgcaggactgaggctgctgctcgtaaggtctttgctgatgctggggttcct
cattactgggatcttgctgtaaacttcaaagatgatgaattttag

DBGET integrated database retrieval system