Nicotiana sylvestris (wood tobacco): 104246271
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Entry
104246271 CDS
T05026
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104246271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsy03021
]
104246271
Enzymes [BR:
nsy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104246271
Transcription machinery [BR:
nsy03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
104246271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
104246271
NCBI-ProteinID:
XP_070018532
LinkDB
All DBs
Position
11:complement(143413184..143453818)
Genome browser
AA seq
1390 aa
AA seq
DB search
MKRTQEIIQFTKEPYIEDVGPRKIKSIQFSLFSEVEILKLGEVEVYRGVYYDSTKKPIPN
GLLDPRMGPPNKNGGCETCHGNFRECPGHYGYLVLTLPVYNVGYLGTVVDLLKCICKCCS
SILLDDKERRVFLKKMRNPRTEPLMKSELQKKVVKKCTSMTSGQKSVTCSKCGYMNGMVK
KGQLKIIHERGNRFLDEFNAAISHKIDLKTSVSVPPEIDPKAVYSLFKNMSDEDCELLYL
SDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQENARLLEDISDTSFQ
NKSLNAWVGLQMEVAQYINSDVRGVPLHLQASKPMSGFTQRLKGKQGRFRGNLSGKRVEY
TGRTVISPDPNLKITEVAIPILMARILTYPERVSQHNIEKLRQCVRNGPNKYPGAKFIKH
PDGTEISLMFSSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWR
TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVASTQD
FLTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALIKPVELWTGKQLFGVLLRP
YSKMRVYVNLTVTEKSYSGKGETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLYSVL
LRDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQEEIYQNYKKCEDR
IQQFNEGKLAVQPGCDAAQTLEAEVTMALNKVRDDIGKICMKALHWRNSPLIMSQCGSKG
SPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPTKSKFPAAKGFVAHSFFDGLSATEF
FFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDNTVRNASASIIQFMYGDDGM
DPSQMEEKKGRPLNFSRLFMKVKATCPPRGEKGLSYSEICEIVNERLSYHDMSPEGGCSE
AFRASLSDFLIKNLAETLKRLREALLLGEEQYAGGDREYLENVALNISGITKKQLQVFLN
MCISRYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINA
AKKINTPIITAKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVMASRLASIAITLDMET
IQVSQLCIDAYTVKQSILQTPKIKLKEQQVKVLNPRKLEVFPQANKDKLHFELHRLKNKL
PAVVVKGITTVQRAVVNKEQERDRKSDAKGETYELLVEGTGLLAVMGIDGVDGRNTKSNH
IMEVQQRLGIEAARISIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQK
MKDSVLMLASFEKTTDHLFSASVNGRDDKIEGVSECIIMGIPMQIGTGMFKLRQCVQQVE
LNYQSEPMLS
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaacacaagagataatccaattcactaaagagccctacattgaagatgttggt
cctagaaaaataaaaagcattcaattttctctattctcagaggtggaaattttgaagtta
ggagaagttgaagtctaccgtggggtttactatgattctactaaaaagcctattcctaat
ggcttgttagatccccgcatggggcctccaaacaagaatgggggttgtgaaacttgtcat
gggaactttagagagtgtccaggtcattacggatacttggtgcttactctacctgtttat
aatgttggatatttaggcacagttgtggacctcttgaagtgcatatgcaagtgctgctcc
tcaatacttctagatgacaaggagcgtcgagtctttttgaagaagatgagaaatccaaga
actgagcctttgatgaagagtgaactacagaaaaaggttgtgaaaaagtgtacttccatg
acaagtggccagaagagtgtcacatgttccaaatgcggatacatgaatggtatggtgaaa
aagggtcagttaaaaatcatccatgaacgaggaaatcgtttcttggacgagtttaatgcg
gctatctctcacaagatagatctcaagacatctgttagtgtgcctccagaaattgatcca
aaagcagtttactccctttttaagaatatgtctgatgaggattgtgagctactctacctc
agcgatagaccagaaaaacttcttgtcacaagtatcccagtgccaccaatagctattcgc
ccttcagtatttgtggatggtggaacacagagcaatgagaacgacatcacagagaggctt
aagcgtattattcaagaaaatgccagacttctcgaagacatttctgataccagttttcaa
aacaagagtctgaatgcttgggttggtctgcaaatggaagttgcacagtatataaacagt
gatgttcgtggagtgccactacatttgcaagctagtaaaccaatgagtggtttcactcaa
cgccttaaaggaaagcagggacgattccgtggaaatctctcggggaagcgtgtggaatat
actggccgaactgttatatctcctgatccaaatttgaaaattacagaggttgccattcca
atactgatggctcgaattttgacatatcctgagcgagtttcacagcacaacatagagaag
ttgaggcaatgtgttcgtaatggaccaaataaatatcctggtgcaaagtttatcaagcat
cctgatggaactgagatatcgttgatgttctcttctagaaagcgtcatgctgatgaattg
aaatttggttatattgttgatcggcatctggaagatggagatatagtcctgtttaacaga
cagccaagtcttcataggatgtcaatcatgtctcatcgggcaaggataatgccatggcgc
acattgagatttaatgaatctgtatgcaatccttataatgctgattttgatggggacgag
atgaatatgcatgtgccacaaacagaagaggcgagaacagaggctcttatgttaatgggg
gttcaaaacaatttatgcactccgaagagtggagaaattttggttgcttctacccaggat
tttttgacgtcttcctttctcatcacgaggaaggacacattctatgatcgcgcttccttt
tcacttatatgctcatatatgggcgacggaatggatcctatagatttaccaactccagca
ctgattaagccggttgagctttggactgggaaacaactctttggcgtgctgctgcgtcca
tattcaaagatgagagtctatgtaaatctaacagtcacagaaaagagttacagcgggaaa
ggggaaacaatgtgcccaagtgatggatttgtttatttccgtaatagtgaactgatcagc
gggcaactcgggaaggctacattaggaaatggaaataaggatggtctatactctgttctg
ttgagggactacaagtcacatgctgctgcaacatgcatgaatcggcttgcaaaattaagt
gctcggtggattggtaatcatggattttctatagggattgatgatgtcacacctggggaa
aacttagttaagcaaaaacaagaagagatttatcaaaattacaagaaatgtgaagatcgt
attcaacaatttaatgaaggaaagcttgccgtgcaaccaggctgtgatgctgcccagact
ctggaggctgaagtaactatggcgttgaataaagttcgtgacgacataggaaaaatttgt
atgaaagcactacattggaggaatagtcctctgatcatgtcacagtgtggttcaaaagga
tccccaattaacataagccagatgattgcatgtgttggtcagcagtccgttggcggtcgt
cgtgctcctgatggattcatagatcgaagtcttcctcattttcctaccaaatcaaagttt
ccagctgctaaagggtttgtagctcattccttttttgacggtttgtcagcaactgagttc
ttttttcacacaatgggaggaagagaaggccttgttgatacagcagttaaaactgctgac
accggatacatgtctcgtcgacttatgaaagctttagaggaccttgctgtttattatgac
aacactgtacgaaatgccagcgcaagtataattcagttcatgtatggtgatgatggcatg
gatccttcacagatggaagagaaaaaaggccgtcctctgaactttagcagattatttatg
aaagttaaggcaacgtgtcctcctagaggtgagaagggtttgtcttactcggaaatctgc
gagatagtcaatgaaaggctctcgtatcatgatatgagtcctgaaggggggtgctcagag
gcattccgggcttcattatcagattttctgattaaaaatttagctgaaaccttgaagaga
ttacgggaagccctcttattgggtgaagagcagtatgcagggggtgaccgtgaatatctt
gaaaacgttgcattaaacatatctggtattacaaagaagcaactacaggtgttcctcaac
atgtgcatctctcgctatcacctgaaaagactagaatcgggaactgctattggtgcaatt
ggagctcagagtattggggaacctgggacacagatgacattgaaaacctttcactttgct
ggagttgcaagcatgaacgttacacttggagtccctcgaataaaagaaattataaatgca
gcaaaaaagatcaatactcctattattactgcaaaacttctgtctgctgctaatttaact
gcagcaaggatgattaaagcccgcattgagaaaactcttttgggacaggtggctaagagt
gtaaagattgtgatggcgtctcgattagcatcaattgctattacgctagatatggagaca
attcaggtttcacaactgtgtattgatgcttatactgtcaagcaatcgattttgcagacc
ccaaaaataaaattgaaagaacagcaagtaaaagttttgaaccccaggaagctggaagtt
tttcctcaggctaataaagataaactgcattttgaacttcaccggttgaaaaataagctt
cctgctgttgttgtgaagggtattactacggttcaaagggctgtggtgaacaaagaacaa
gaaagagatcgtaagagtgatgccaaaggagaaacatatgagttgcttgttgaaggtacc
ggtctcctagccgtaatgggcattgacggagttgatgggcgtaatacaaagagtaatcat
ataatggaggtgcaacaaagactaggcattgaagcagcaaggatctctataattgatgag
attaactataccatgtcaagtcatggaatgacaatagacttgcggcacatgatgcttcta
gcagatctgatgacatataagggtgaagttctgggaataaccagacatggcgttcagaaa
atgaaagatagcgtactgatgttagcctcatttgagaagacaactgaccacctgtttagt
gcatctgtaaatggaagggatgataagatagaaggagttagcgaatgcatcatcatgggc
ataccaatgcagataggcactgggatgtttaaacttcggcaatgtgttcagcaggttgag
ctgaattatcaatcagaacctatgttatcctag
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integrated database retrieval system
