KEGG   Nicotiana sylvestris (wood tobacco): 104246524
Entry
104246524         CDS       T05026                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104246524
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nsy03019]
    104246524
   03041 Spliceosome [BR:nsy03041]
    104246524
Messenger RNA biogenesis [BR:nsy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     104246524
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     104246524
Spliceosome [BR:nsy03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    104246524
SSDB
Motif
Pfam: RRM_1 RRM_Nup35 RRM_7 RL RRM_3 NarE
Other DBs
NCBI-GeneID: 104246524
NCBI-ProteinID: XP_009800639
UniProt: A0A1U7YN22
LinkDB
Position
3:23050283..23054007
AA seq 363 aa
MEELKKRKLDEMANNGQSDSNSTSSLSVEELRSLLDHFAKPQLVDLLAKLGSQYPSIAEE
IKSVASAEQSNNKDSVASADPALRKLFVRGLAWNTTSETLCAAFTEHGEIEEGAVITDKV
TGVSRGYGFITYKDVESAQMALKAPSKMIDGRMAVCNLACEGLSSTTVTADQAQRKLYIG
GLSSDTTSEMLLSFFSRHGEIEEGSVAYNKDTKTSRGFGFVTYKTVEGAKKALNDPQRIL
GGRNLTVKLADNHKGKVTQSQVRATMVPMSMPLAPGYPQAQKTHSGPAAPVGYGYPQAMA
AYTNSTYSSQPAAYTNSTYSSQPGAAPPYSGQAQFPYPQYPVKQEPQTTPASFGGYPYYM
GKQ
NT seq 1092 nt   +upstreamnt  +downstreamnt
atggaggagttgaagaagaggaagcttgatgaaatggccaataatggtcaaagtgattct
aactcaacatcatcattatcagtagaagaattgcggtctttgcttgatcattttgctaaa
ccccagcttgttgatcttctcgctaaactagggtcacaatacccttctattgcagaagaa
attaaaagtgttgcaagcgcagaacaatcaaataataaagatagtgttgcaagtgcagat
ccagctcttcgaaagctttttgtccgtggtttagcttggaatactacatcagaaactttg
tgtgctgcgtttacagagcatggtgaaattgaagagggtgctgtgattactgacaaagta
actggagtatcacgtggctatggtttcatcacttataaagacgtggaatctgctcagatg
gcccttaaagcaccaagcaagatgatagatggtcgcatggctgtttgtaacctcgcttgt
gaaggtttaagcagtactactgttaccgctgaccaagcccaaaggaagctgtatattgga
ggtttatcatcagacacaacaagtgagatgttgctcagcttttttagtaggcatggtgag
atagaagaaggttcagttgcatataacaaggacacgaagacatcacgtggttttggtttt
gtcacatacaagacggttgagggtgcaaagaaagctctaaacgatccacaaaggattctt
gggggcaggaatcttactgtgaagcttgctgataatcacaagggtaaagttactcagtcc
caggtacgagcaactatggtgccaatgtccatgccattggcacctgggtatccacaagct
cagaagacgcattccggcccggcagcacctgttggttacggttatccgcaagcaatggct
gcttacacaaattcaacatactcaagtcaaccagctgcttacacaaactcaacatactca
agtcaaccaggtgcagctcctccatactcgggccaggctcaatttccttacccccagtat
cctgttaagcaagagcctcaaacaacaccagcttcttttggaggttatccatactacatg
ggaaagcaatga

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